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13_1_40cm_3_scaffold_3174

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3174_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1..630)
DNA (630bp) protein (210aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A693_GEMAT
putative ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC transporter related protein
13_1_40cm_3_scaffold_3174_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(627..1352)
DNA (726bp) protein (242aa)
Putative transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH0_GEMAT
putative transporter; K02066 putative ABC transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative transporter
13_1_40cm_3_scaffold_3174_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1411..2376)
DNA (966bp) protein (322aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor
13_1_40cm_3_scaffold_3174_trna_1
unknown

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2531..2603
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_3174_trna_2
unknown

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2660..2732
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_3174_trna_3
unknown

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2760..2833
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_3174_trna_4
unknown

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2925..2998
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_3174_trna_5
unknown

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3002..3075
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_3174_trna_6
unknown

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3120..3194
DNA (75bp)
transferRNA
13_1_40cm_3_scaffold_3174_trna_7
unknown

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3232..3305
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_3174_4
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

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comp(3430..4473)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M5H8_ANAVT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA23758.1}; Flags: Precursor;; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 2
13_1_40cm_3_scaffold_3174_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(5065..5910)
DNA (846bp) protein (282aa)
prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51] Tax=RBG_16_Chloroflexi_63_12_curated
prephenate dehydratase (EC:4.2.1.51)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003697C56
13_1_40cm_3_scaffold_3174_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5907..6992)
DNA (1086bp) protein (362aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
Dihydroxy-acid dehydratase (EC:4.2.1.9)
dihydroxy-acid dehydratase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035DBF2D
13_1_40cm_3_scaffold_3174_7
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(6944..7531)
DNA (588bp) protein (196aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
dihydroxy-acid dehydratase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035DBF2D
ilvD; dihydroxy-acid dehydratase
13_1_40cm_3_scaffold_3174_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(7528..8613)
DNA (1086bp) protein (362aa)
3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBS5_9BACT
13_1_40cm_3_scaffold_3174_9
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8610..9194)
DNA (585bp) protein (195aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Geobacillus sp. JF8 RepID=S5Z819_9BACI
isopropylmalate isomerase
13_1_40cm_3_scaffold_3174_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9194..10621)
DNA (1428bp) protein (476aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33 4.2.1.35) id=14425708 bin=bin1_lowGC species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin1_lowGC organism_group=Unknown_CP
isopropylmalate isomerase large subunit (EC:4.2.1.33)
13_1_40cm_3_scaffold_3174_11
Thermodesulfobacterium geofontis, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(10618..11682)
DNA (1065bp) protein (355aa)
Ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
Ketol-acid reductoisomerase n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C4Y1_THEGP
13_1_40cm_3_scaffold_3174_12
unknown

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comp(11679..11939)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_3_scaffold_3174_13
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(11936..13612)
DNA (1677bp) protein (559aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798
Acetolactate synthase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDV2_THET1
acetolactate synthase large subunit
13_1_40cm_3_scaffold_3174_14
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(13619..15106)
DNA (1488bp) protein (496aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000
2-isopropylmalate synthase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBS6_9BACT
2-isopropylmalate synthase
13_1_40cm_3_scaffold_3174_15
unknown

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comp(15356..15595)
DNA (240bp) protein (80aa)

This feature has no annotations

Displaying 22 items

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