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13_1_40cm_3_scaffold_5182_19

Organism: 13_1_40CM_3_Gemmatimonadetes_65_8

partial RP 14 / 55 BSCG 11 / 51 ASCG 5 / 38
Location: comp(13791..14582)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 284.0
  • Bit_score: 200
  • Evalue 3.10e-48
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00037CD54A similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 284.0
  • Bit_score: 200
  • Evalue 2.90e-48
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 286.0
  • Bit_score: 195
  • Evalue 2.60e-47

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 792
GTGCTGGTCGCGAAGCCGGCCGGCCCGACGTCTCATGATGTCGTCGATATCGTGCGCCGCACGCTGGGCGAGCAGCGCGTCGGCCACCTGGGAACGCTGGATCCGTTCGCCAAGGGATTGCTGGTGCTCGTGGTGGGGCGGGCCACCCGACTCGCGACCTTCGCGACGGAGTGGCCGAAGTCATATGACGGAGTCATTCGGCTCGGCGTCACGACCGACACCGATGATGTGACCGGCTCTGTCGTGGCGACGGCTCCCTGGACGGCAATCACCCCGTCACAGCTCGCCGAGTCGGCGGTGAAGATCGAGGGCGAGCGCGCGTACCGCCGCGCGCGACGGGGTGAGACCGTCGAGCCGGCCGCGCGCCCGGTCGAGATTCGCGAGCTCGAGATCGTCGAGGCGGCCGTGCCCGATCTCGAGTTTCGGGCGACGGTGAGTGGCGGAACGTATCTGCGGTCCCTCGCGCGCGACATCGGCGCCGCGCTTGGATGCGGGGCGCATCTTTCGGCGCTCCGACGGACGGCGGTGGGTCCATTCCGGCTCGAGGAAGCCGTTGCGCCGGAGGCCGTAACCCCCGCGGCCGTTCGCGACGCTTCGATCTTGGTGGCAGACTTGCCGCGCCGGAATGTCAATCGGACTGAACGGGACGCGGTCGTGCATGGGCGGCCACTCGCGCGGACGTCGGGGGGAGCGCAAGGACGTGTTGCTCTTTTCGCCGACGATGAGTTGCTCGGCGTGGCCGAATGCGTCGGCGAGGTCTTGAAGCCGCGCGTCGTGGTGGCAGAGGAGTGA
PROTEIN sequence
Length: 264
VLVAKPAGPTSHDVVDIVRRTLGEQRVGHLGTLDPFAKGLLVLVVGRATRLATFATEWPKSYDGVIRLGVTTDTDDVTGSVVATAPWTAITPSQLAESAVKIEGERAYRRARRGETVEPAARPVEIRELEIVEAAVPDLEFRATVSGGTYLRSLARDIGAALGCGAHLSALRRTAVGPFRLEEAVAPEAVTPAAVRDASILVADLPRRNVNRTERDAVVHGRPLARTSGGAQGRVALFADDELLGVAECVGEVLKPRVVVAEE*