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13_1_40cm_3_scaffold_1304

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1304_1
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..902
DNA (900bp) protein (300aa)
ABC transporter, permease protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09A54_STIAD
ABC transporter-like permease
ABC transporter-like permease {ECO:0000313|EMBL:ADO68890.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" sourc
13_1_40cm_3_scaffold_1304_2
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

1055..2152
DNA (1098bp) protein (366aa)
Protein TolA n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IZN9_9GAMM
Putative uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
hypothetical protein
13_1_40cm_3_scaffold_1304_3
unknown

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3116..3574
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_3_scaffold_1304_4
unknown

Not on your lists

comp(3874..4263)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_3_scaffold_1304_5
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4618..5238)
DNA (621bp) protein (207aa)
Methyltransferase type 11 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JD19_ANAD2
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACL64047.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_40cm_3_scaffold_1304_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

5346..5681
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGY8_ANADF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_3_scaffold_1304_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5668..6462
DNA (795bp) protein (265aa)
Beta-lactamase class A {ECO:0000313|EMBL:CDM65023.1}; EC=3.5.2.6 {ECO:0000313|EMBL:CDM65023.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyri
Beta-lactamase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FNK7_STIAD
beta-lactamase
13_1_40cm_3_scaffold_1304_8
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6499..7278
DNA (780bp) protein (260aa)
fadI; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
3-ketoacyl-CoA thiolase protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S5M4_9DELT
3-ketoacyl-CoA thiolase protein {ECO:0000313|EMBL:ERK91031.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source
13_1_40cm_3_scaffold_1304_9
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7314..7742
DNA (429bp) protein (143aa)
fadI; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ACL63793.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ACL63793.1};; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterin
Acetyl-CoA acetyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JAY2_ANAD2
13_1_40cm_3_scaffold_1304_10
unknown

Not on your lists

comp(7793..8062)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_3_scaffold_1304_11
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8221..9891
DNA (1671bp) protein (557aa)
Multifunctional fatty acid oxidation complex subunit alpha {ECO:0000313|EMBL:KFA90025.1}; EC=1.1.1.35 {ECO:0000313|EMBL:KFA90025.1};; EC=4.2.1.17 {ECO:0000313|EMBL:KFA90025.1};; EC=5.1.2.3 {ECO:000031
Enoyl-CoA hydratase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PEC1_9DELT
fadJ; multifunctional fatty acid oxidation complex subunit alpha
13_1_40cm_3_scaffold_1304_12
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9878..10585)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z1W7_9ACTN
VIT family protein {ECO:0000313|EMBL:KJF17746.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
hypothetical protein
13_1_40cm_3_scaffold_1304_13
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(10575..11123)
DNA (549bp) protein (183aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AEP12413.1}; EC=5.1.3.13 {ECO:0000313|EMBL:AEP12413.1};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidoba
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF3_CHLTF
13_1_40cm_3_scaffold_1304_14
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11128..11808)
DNA (681bp) protein (227aa)
DNA-binding response regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U897_MYXSD
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:AGC42704.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source=
13_1_40cm_3_scaffold_1304_15
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11821..13260)
DNA (1440bp) protein (480aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cys
Sensor histidine kinase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MQQ4_CORCM rbh
srrB3; sensor histidine kinase
13_1_40cm_3_scaffold_1304_16
unknown

Not on your lists

13381..13656
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_3_scaffold_1304_17
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13653..17012)
DNA (3360bp) protein (1120aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxoco
ATP-dependent DNA helicase UvrD n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U8Z7_MYXSD rbh
ATP-dependent DNA helicase UvrD
13_1_40cm_3_scaffold_1304_18
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17005..19623)
DNA (2619bp) protein (873aa)
Conserved uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FYL3_STIAD rbh
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO71138.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" s
13_1_40cm_3_scaffold_1304_19
unknown

Not on your lists

19637..19813
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_3_scaffold_1304_20
unknown

Not on your lists

comp(20156..20671)
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_40cm_3_scaffold_1304_21
RLO_PLX_64_10, Bacteria

Not on your lists

20752..22065
DNA (1314bp) protein (438aa)
metallophosphoesterase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
13_1_40cm_3_scaffold_1304_22
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22077..22973
DNA (897bp) protein (299aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cy
Methylenetetrahydrofolate reductase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDS2_ANADF
5,10-methylenetetrahydrofolate reductase
13_1_40cm_3_scaffold_1304_23
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23094..23414
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHW2_ANADF
XRE family transcriptional regulator {ECO:0000313|EMBL:GAN45013.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="
hypothetical protein
13_1_40cm_3_scaffold_1304_24
unknown

Not on your lists

comp(24127..24819)
DNA (693bp) protein (231aa)

This feature has no annotations

Displaying 24 items

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