ggKbase home page

13_1_40cm_3_scaffold_1383

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1383_1
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..627
DNA (627bp) protein (209aa)
Oxidoreductase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P6N1_9DELT
Oxidoreductase {ECO:0000313|EMBL:EPX58836.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter
iolS; aldo/keto reductase
13_1_40cm_3_scaffold_1383_trna_1
unknown

Not on your lists

684..757
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_1383_2
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(871..1755)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI0003714439 rbh
ABC transporter permease Tax=Caldatribacterium saccharofermentans
ABC transporter permease
13_1_40cm_3_scaffold_1383_3
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(1752..2669)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037E6BC1
ABC transporter permease; K02025 multiple sugar transport system permease protein Tax=Caldatribacterium californiense
ABC transporter permease
13_1_40cm_3_scaffold_1383_4
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(2682..4304)
DNA (1623bp) protein (541aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI0003682263 rbh
putative ABC transporter substrate binding protein Tax=Caldatribacterium saccharofermentans
putative ABC transporter substrate binding protein
13_1_40cm_3_scaffold_1383_5
unknown

Not on your lists

comp(5158..5529)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_3_scaffold_1383_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5995..6396
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRN1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57502.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
13_1_40cm_3_scaffold_1383_7
unknown

Not on your lists

comp(6555..6992)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_3_scaffold_1383_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7023..7667
DNA (645bp) protein (215aa)
hypothetical protein; K06137 pyrroloquinoline-quinone synthase [EC:1.3.3.11] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PED0_9BACT
hypothetical protein
13_1_40cm_3_scaffold_1383_9
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7777..8562
DNA (786bp) protein (262aa)
Putative lipoprotein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MLQ5_CORCM
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AFE04559.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corall
13_1_40cm_3_scaffold_1383_10
unknown

Not on your lists

8569..9117
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_3_scaffold_1383_11
unknown

Not on your lists

9072..9380
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_3_scaffold_1383_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(9398..10651)
DNA (1254bp) protein (418aa)
hypothetical protein id=14430236 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_3_scaffold_1383_13
unknown

Not on your lists

10952..11194
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_3_scaffold_1383_14
unknown

Not on your lists

11308..11550
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_3_scaffold_1383_15
unknown

Not on your lists

comp(11592..12323)
DNA (732bp) protein (244aa)

This feature has no annotations

13_1_40cm_3_scaffold_1383_16
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13147..13818)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CNA4_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPX63116.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
13_1_40cm_3_scaffold_1383_17
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13948..14658
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UHB2_ANASK
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1383_18
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14714..15415
DNA (702bp) protein (234aa)
Type IV fimbrial assembly, ATPase PilB n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QE82_9DELT
Type IV fimbrial assembly, ATPase PilB {ECO:0000313|EMBL:EPX59614.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacte
general secretion pathway protein E
13_1_40cm_3_scaffold_1383_19
Pseudogymnoascus pannorum, Pseudogymnoascus, Leotiomycetes, Ascomycota, Fungi

Not on your lists

15506..17380
DNA (1875bp) protein (625aa)
General secretion pathway protein E n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MMU6_CORCM
Uncharacterized protein {ECO:0000313|EMBL:KFY93243.1}; TaxID=1420913 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseu
general secretion pathway protein E
13_1_40cm_3_scaffold_1383_20
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18055..18354
DNA (300bp) protein (100aa)
Metal dependent phosphohydrolase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGY9_ANADF
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ABS27985.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxoba
13_1_40cm_3_scaffold_1383_21
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18458..19090
DNA (633bp) protein (211aa)
RNA polymerase sigma factor n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UIV3_MYXSD
RNA polymerase sigma factor {ECO:0000313|EMBL:AKF82454.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="My
RNA polymerase sigma factor
13_1_40cm_3_scaffold_1383_22
unknown

Not on your lists

19087..19314
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_3_scaffold_1383_23
Eimeria mitis, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

19311..20372
DNA (1062bp) protein (354aa)
Translation initiation factor IF-2 n=1 Tax=Rhodococcus opacus (strain B4) RepID=IF2_RHOOB
infB; translation initiation factor IF-2
Uncharacterized protein {ECO:0000313|EMBL:CDJ33815.1}; TaxID=44415 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeri
13_1_40cm_3_scaffold_1383_24
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20499..21323
DNA (825bp) protein (275aa)
Heat shock protein 22.5 (Hsp22.5) n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QSM7_9DELT
Heat shock protein 22.5 (Hsp22.5) {ECO:0000313|EMBL:KFE66412.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" so
Flp pilus assembly protein CpaB
13_1_40cm_3_scaffold_1383_25
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21323..22165
DNA (843bp) protein (281aa)
Type II secretion system protein F domain protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MM74_CORCM
type II secretion system protein F domain-containing protein
Type II secretion system protein F domain protein {ECO:0000313|EMBL:AFE06063.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Co
13_1_40cm_3_scaffold_1383_26
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22162..23070
DNA (909bp) protein (303aa)
Type II secretion system protein F domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D3F7_MYXXD
type II secretion system protein F domain
Type II secretion system protein F domain protein {ECO:0000313|EMBL:ABF85939.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myx
13_1_40cm_3_scaffold_1383_27
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23072..23965
DNA (894bp) protein (298aa)
FHA domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D3F8_MYXXD
FHA domain-containing protein
FHA domain protein {ECO:0000313|EMBL:ABF92065.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus x
13_1_40cm_3_scaffold_1383_28
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23970..25274
DNA (1305bp) protein (435aa)
FHA domain protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FPK5_STIAD
FHA domain-containing protein
FHA domain protein {ECO:0000313|EMBL:ADO73200.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmate
13_1_40cm_3_scaffold_1383_29
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

25274..26683
DNA (1410bp) protein (470aa)
xseA; exodeoxyribonuclease VII large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGW1_ANASK
Displaying items 1-30 of 35 in total

View Taxonomy