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13_1_40cm_3_scaffold_1532

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1532_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1..867
DNA (867bp) protein (289aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=4927118 bin=GWA2_Ignavibacteria_55_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_3_scaffold_1532_2
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

895..1962
DNA (1068bp) protein (356aa)
topA; DNA topoisomerase I (EC:5.99.1.2) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRN9_SORCE
hypothetical protein
13_1_40cm_3_scaffold_1532_3
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1988..2599
DNA (612bp) protein (204aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
alkylhydroperoxidase n=1 Tax=Cupriavidus sp. WS RepID=UPI000361948B rbh
alkylhydroperoxidase
13_1_40cm_3_scaffold_1532_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(2663..3391)
DNA (729bp) protein (243aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4N0_SPHTD
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACZ39197.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;"
13_1_40cm_3_scaffold_1532_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3541..5058)
DNA (1518bp) protein (506aa)
AMP-dependent synthetase and ligase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUD1_RUBXD
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABG04997.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" so
13_1_40cm_3_scaffold_1532_6
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5236..5625
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULT4_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL65126.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_3_scaffold_1532_7
unknown

Not on your lists

comp(5691..6134)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_3_scaffold_1532_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6516..8735
DNA (2220bp) protein (740aa)
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IWI0_9PROT
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
13_1_40cm_3_scaffold_1532_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8893..10449
DNA (1557bp) protein (519aa)
Oxalate/formate antiporter n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALA4_AZOBR
major facilitator superfamily protein; K08177 MFS transporter, OFA family, oxalate/formate antiporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
spermidine/putrescine ABC transporter substrate-binding protein
13_1_40cm_3_scaffold_1532_10
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10486..11766)
DNA (1281bp) protein (427aa)
Major facilitator family transporter n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MTR2_CORCM rbh
ybfB; major facilitator family transporter
Major facilitator family transporter {ECO:0000313|EMBL:AFE10735.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;
13_1_40cm_3_scaffold_1532_11
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11763..12776)
DNA (1014bp) protein (338aa)
Transcriptional regulator, AraC family n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TTS9_9DELT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERK85768.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;"
transcriptional regulator
13_1_40cm_3_scaffold_1532_12
unknown

Not on your lists

comp(12831..13103)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_3_scaffold_1532_13
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13360..14349)
DNA (990bp) protein (330aa)
Dihydroxyacetone kinase, DhaK subunit n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QMT9_METS6
dak1; dihydroxyacetone kinase subunit DhaK
Tax=BJP_S1_SUB10_Methylophilales_55_32
13_1_40cm_3_scaffold_1532_14
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14372..14707)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003747D05
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE98233.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
13_1_40cm_3_scaffold_1532_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14767..16185)
DNA (1419bp) protein (473aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HHA8_9BRAD rbh
phosphoenolpyruvate-protein phosphotransferase
13_1_40cm_3_scaffold_1532_16
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16619..16942)
DNA (324bp) protein (108aa)
Dihydroxyacetone kinase, phosphotransfer subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HIB5_9BRAD
Dihydroxyacetone kinase, phosphotransfer subunit {ECO:0000313|EMBL:ERF84186.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;"
PTS system mannnose-specific transporter subunit IIA
13_1_40cm_3_scaffold_1532_17
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17005..17664)
DNA (660bp) protein (220aa)
dihydroxyacetone kinase n=1 Tax=Methylococcus capsulatus RepID=UPI0002DB28CC
dihydroxyacetone phosphatase
Dihydroxyacetone phosphatase family protein {ECO:0000313|EMBL:AAU90835.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" sour
13_1_40cm_3_scaffold_1532_18
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17661..18623)
DNA (963bp) protein (321aa)
Putative sugar ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z994_9BRAD
putative sugar ABC transporter ATP-binding protein
Putative sugar ABC transporter, ATP-binding protein containing a substrate binding domain in C-terminal (SmoK-like) {ECO:0000313|EMBL:CCD83722.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alpha
13_1_40cm_3_scaffold_1532_19
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18650..19063)
DNA (414bp) protein (138aa)
ABC transporter related protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0Q3_STAND
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC48608.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brady
ABC transporter
13_1_40cm_3_scaffold_1532_20
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19717..19920)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FQR9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX16471.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
13_1_40cm_3_scaffold_1532_21
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19917..20870)
DNA (954bp) protein (318aa)
ABC-type sugar transport system, permease component n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0V1N8_RHILV rbh
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EJC66888.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
transmembrane component of ABC transporter
13_1_40cm_3_scaffold_1532_22
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20880..21836)
DNA (957bp) protein (319aa)
Putative sugar ABC transporter, permease protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SXM6_9BRAD rbh
Putative sugar ABC transporter, permease protein {ECO:0000313|EMBL:CCD98953.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" s
putative sugar ABC transporter permease protein
13_1_40cm_3_scaffold_1532_23
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21917..23242)
DNA (1326bp) protein (442aa)
ABC transporter substrate-binding protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI0003654EED rbh
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACC75402.1}; Flags: Precursor;; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; B
Displaying 23 items

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