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13_1_40cm_3_scaffold_4598

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4598_1
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1..987
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9J0_ACIC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO32898.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
13_1_40cm_3_scaffold_4598_2
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1411..1956
DNA (546bp) protein (182aa)
NAD dependent epimerase/dehydratase family n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08SV5_STIAD
NAD dependent epimerase/dehydratase family protein
NAD dependent epimerase/dehydratase family {ECO:0000313|EMBL:EAU63553.1}; NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:ADO70512.1}; TaxID=378806 species="Bacteria; Proteobacter
13_1_40cm_3_scaffold_4598_3
unknown

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comp(1926..3560)
DNA (1635bp) protein (545aa)

This feature has no annotations

13_1_40cm_3_scaffold_4598_4
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3590..4486
DNA (897bp) protein (299aa)
Hsp33 family protein n=3 Tax=Myxococcus xanthus RepID=Q1DDE0_MYXXD
heat shock protein 33
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus
13_1_40cm_3_scaffold_4598_5
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4477..5013)
DNA (537bp) protein (179aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFJ7_ANASK
RNA polymerase sigma-70 factor, ECF subfamily protein {ECO:0000313|EMBL:KFE71900.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacterace
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_3_scaffold_4598_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5031..6329
DNA (1299bp) protein (433aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MGB9_CORCM rbh
serS; seryl-tRNA synthetase
13_1_40cm_3_scaffold_4598_7
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6377..6727
DNA (351bp) protein (117aa)
Mannose-1-phosphate guanylyltransferase protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RWX9_9DELT
Cupin {ECO:0000313|EMBL:AKF81896.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02
cupin domain-containing protein
13_1_40cm_3_scaffold_4598_8
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7435..7731)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BUT9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM73341.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
hypothetical protein
13_1_40cm_3_scaffold_4598_9
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7741..8541)
DNA (801bp) protein (267aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CBM1_9RHOB rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFO34108.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
carbohydrate ABC transporter permease
13_1_40cm_3_scaffold_4598_10
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8543..9409)
DNA (867bp) protein (289aa)
binding-protein-dependent transport system inner membrane protein (EC:4.1.2.13)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BUT7_9RHIZ rbh
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EIM73339.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae;
13_1_40cm_3_scaffold_4598_11
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9406..10485)
DNA (1080bp) protein (360aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CBL9_9RHOB rbh
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000313|EMBL:EFO34106.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium
sugar ABC transporter, ATP-binding protein
13_1_40cm_3_scaffold_4598_12
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10502..11587)
DNA (1086bp) protein (362aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CBL8_9RHOB rbh
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000313|EMBL:EFO34105.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium
ABC transporter
13_1_40cm_3_scaffold_4598_13
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11651..13165)
DNA (1515bp) protein (505aa)
ABC transporter substrate-binding protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J0T8_9DELT rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESQ07924.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; envir
carbohydrate ABC transporter substrate-binding protein
Displaying 13 items

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