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13_1_40cm_3_scaffold_479

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_479_1
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..316
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2I4G2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJL50720.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
13_1_40cm_3_scaffold_479_2
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

313..933
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F86D76
membrane protein
Membrane protein {ECO:0000313|EMBL:AIF48092.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
13_1_40cm_3_scaffold_479_3
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(934..3141)
DNA (2208bp) protein (736aa)
hypothetical protein n=1 Tax=Vibrio rumoiensis RepID=UPI00036B171A
Putative multicopper oxidase {ECO:0000313|EMBL:CCD95862.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobiu
multicopper oxidase
13_1_40cm_3_scaffold_479_4
unknown

Not on your lists

3464..3811
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_3_scaffold_479_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3888..4721
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQN5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90472.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
13_1_40cm_3_scaffold_479_6
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4817..6664
DNA (1848bp) protein (616aa)
ABC transporter related n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTD2_ACCPU rbh
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACV36065.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
13_1_40cm_3_scaffold_479_7
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6665..7675
DNA (1011bp) protein (337aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTD1_ACCPU
Cardiolipin synthetase {ECO:0000313|EMBL:EXI68918.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
phospholipase D/transphosphatidylase
13_1_40cm_3_scaffold_479_8
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7682..8149)
DNA (468bp) protein (156aa)
apbA2; ketopantoate reductase ApbA (EC:1.1.1.169)
Acyl dehydratase n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GQB6_CUPNN
Acyl dehydratase {ECO:0000313|EMBL:AEI80673.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (stra
13_1_40cm_3_scaffold_479_9
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8327..9091
DNA (765bp) protein (255aa)
pnaE; polyneuridine-aldehyde esterase (EC:3.1.1.78)
Polyneuridine-aldehyde esterase {ECO:0000313|EMBL:CDG86025.1}; EC=3.1.1.78 {ECO:0000313|EMBL:CDG86025.1};; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxaloba
Signal peptide protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IVN1_HERSS rbh
13_1_40cm_3_scaffold_479_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

9487..10086
DNA (600bp) protein (200aa)
Transcriptional regulator, NifA subfamily, Fis Family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026M7_SOLUE
Fis family transcriptional regulator
Transcriptional regulator, NifA subfamily, Fis Family {ECO:0000313|EMBL:ABJ83042.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter
13_1_40cm_3_scaffold_479_11
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10025..10381
DNA (357bp) protein (119aa)
Transcriptional regulator, NifA subfamily, Fis Family n=1 Tax=Dickeya dadantii (strain Ech703) RepID=C6CD27_DICDC
Fis family transcriptional regulator
Transcriptional regulator, NifA subfamily, Fis Family {ECO:0000313|EMBL:ACS85068.1}; TaxID=579405 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya
13_1_40cm_3_scaffold_479_12
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10400..10924)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003793E31
Uncharacterized protein {ECO:0000313|EMBL:EGI75610.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis
hypothetical protein
13_1_40cm_3_scaffold_479_13
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11188..11787
DNA (600bp) protein (200aa)
TetR family transcriptional regulator n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MI91_CORCM
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:KFE72025.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hya
acrR1; TetR family transcriptional regulator
13_1_40cm_3_scaffold_479_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11784..13022
DNA (1239bp) protein (413aa)
Acetyl-CoA acyltransferase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q097I3_STIAD rbh
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:EYF08251.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
acetyl-CoA acyltransferase
13_1_40cm_3_scaffold_479_15
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13019..14233
DNA (1215bp) protein (405aa)
RND family efflux transporter MFP subunit n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U427_MYXSD rbh
Uncharacterized protein {ECO:0000313|EMBL:AKF84859.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
RND family efflux transporter MFP subunit
13_1_40cm_3_scaffold_479_16
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14233..14505
DNA (273bp) protein (91aa)
Multidrug resistance protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MK65_CORCM
emrB; multidrug resistance protein
Multidrug resistance protein {ECO:0000313|EMBL:AFE08652.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source
13_1_40cm_3_scaffold_479_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14586..15179
DNA (594bp) protein (198aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRA5_9GAMM
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
13_1_40cm_3_scaffold_479_18
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15194..17647
DNA (2454bp) protein (818aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGR4_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27910.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_3_scaffold_479_19
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

17658..18836
DNA (1179bp) protein (393aa)
Metal dependent phosphohydrolase n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EI72_CHLL2
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACD89902.1}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Ch
13_1_40cm_3_scaffold_479_20
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18954..19916
DNA (963bp) protein (321aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococc
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JCJ4_ANAD2
13_1_40cm_3_scaffold_479_21
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19877..20749
DNA (873bp) protein (291aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaprote
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HIM2_ANADF
ATP-dependent metalloprotease FtsH
13_1_40cm_3_scaffold_479_22
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20931..21608)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R670_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX64493.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_1_40cm_3_scaffold_479_23
bacterium YEK0313, Bacteria

Not on your lists

comp(21761..22684)
DNA (924bp) protein (308aa)
PREDICTED: momilactone A synthase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C136A4 rbh
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase {ECO:0000313|EMBL:CEJ09925.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
short-chain dehydrogenase/reductase SDR
13_1_40cm_3_scaffold_479_24
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22717..23361)
DNA (645bp) protein (215aa)
LuxR family transcriptional regulator n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037F1F8E
LuxR family transcriptional regulator {ECO:0000313|EMBL:KDN17309.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifam
LuxR family transcriptional regulator
13_1_40cm_3_scaffold_479_25
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23358..24539)
DNA (1182bp) protein (394aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADB76628.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ADB76628.1};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophila
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEJ2_GEOOG
13_1_40cm_3_scaffold_479_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24665..25648
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YD98_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42405.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_3_scaffold_479_27
unknown

Not on your lists

comp(25660..25998)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_3_scaffold_479_28
Leptospirillum sp. Group IV, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

26298..27425
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Leptospirillum sp. Group IV 'UBA BS' RepID=T0XM36_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EQD23881.1}; TaxID=1260983 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group IV 'UBA BS'.;"
ABC transporter permease
13_1_40cm_3_scaffold_479_29
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

27435..28124
DNA (690bp) protein (230aa)
ABC transporter related n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYQ9_9BACT
ABC transporter related {ECO:0000313|EMBL:EES52344.1}; TaxID=412449 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;"
ABC-type export system ATPase component DevA family
13_1_40cm_3_scaffold_479_30
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

28150..29088
DNA (939bp) protein (313aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYR0_9BACT
secretion protein HlyD Tax=RBG_16_Acidobacteria_70_10_curated
HlyD-like secretion protein
Displaying items 1-30 of 57 in total

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