ggKbase home page

13_1_40cm_3_scaffold_4621

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4621_1
unknown

Not on your lists

comp(1..444)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_3_scaffold_4621_2
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(441..1604)
DNA (1164bp) protein (388aa)
FHA/TonB domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MGH9_CORCM rbh
FHA/TonB domain-containing protein
FHA/TonB domain-containing protein {ECO:0000313|EMBL:AFE05102.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;"
13_1_40cm_3_scaffold_4621_3
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1608..3821
DNA (2214bp) protein (738aa)
Type IV fimbrial assembly, ATPase PilB n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W1E2_9MICO
Type IV fimbrial assembly, ATPase PilB {ECO:0000313|EMBL:EPR76426.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
type IV-a pilus assembly atpase pilb
13_1_40cm_3_scaffold_4621_4
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4019..4618
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI000367A255
Uncharacterized protein {ECO:0000313|EMBL:ETR75804.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
13_1_40cm_3_scaffold_4621_5
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4620..5270)
DNA (651bp) protein (217aa)
50S ribosomal protein L3 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=RL3_ANADE
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
13_1_40cm_3_scaffold_4621_6
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5559..6407
DNA (849bp) protein (283aa)
Transglycosylase SLT domain protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P1E1_9DELT
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EPX56946.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;
transglycosylase slt domain-containing protein
13_1_40cm_3_scaffold_4621_7
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6464..6676
DNA (213bp) protein (71aa)
CsbD family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MP30_CORCM
CsbD family protein
CsbD family protein {ECO:0000313|EMBL:AFE07581.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallo
13_1_40cm_3_scaffold_4621_8
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6733..7383)
DNA (651bp) protein (217aa)
Histidine kinase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J815_ANAD2
Sensor protein RstB {ECO:0000313|EMBL:GAO03731.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" sour
histidine kinase
13_1_40cm_3_scaffold_4621_9
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7593..8501
DNA (909bp) protein (303aa)
RNA polymerase sigma factor n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBF5_ANADF rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source
RNA polymerase sigma factor RpoH
13_1_40cm_3_scaffold_4621_10
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8531..9703
DNA (1173bp) protein (391aa)
Major facilitator superfamily MFS_1 transporter n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IHG2_ANADE
major facilitator superfamily protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
major facilitator transporter
13_1_40cm_3_scaffold_4621_11
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9707..10789)
DNA (1083bp) protein (361aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000255|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000255|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000255|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=ENO_ANADE
Displaying 11 items

View Taxonomy