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13_1_40cm_3_scaffold_5347

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5347_1
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(122..634)
DNA (513bp) protein (171aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PAN0_9DELT
phosphoenolpyruvate-protein phosphotransferase PtsI
13_1_40cm_3_scaffold_5347_2
unknown

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786..1313
DNA (528bp) protein (176aa)

This feature has no annotations

13_1_40cm_3_scaffold_5347_3
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1840..2265)
DNA (426bp) protein (142aa)
HEAT repeat-containing PBS lyase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CCM6_MYXFH
HEAT repeat-containing PBS lyase
HEAT repeat-containing PBS lyase {ECO:0000313|EMBL:AEI62280.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source
13_1_40cm_3_scaffold_5347_4
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2211..3368)
DNA (1158bp) protein (386aa)
HEAT repeat-containing PBS lyase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MS48_CORCM
HEAT repeat-containing PBS lyase
HEAT repeat-containing PBS lyase {ECO:0000313|EMBL:AFE03989.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" so
13_1_40cm_3_scaffold_5347_5
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3480..4394
DNA (915bp) protein (305aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=404589 species="B
Methionyl-tRNA formyltransferase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7G8_ANADF rbh
methionyl-tRNA formyltransferase
13_1_40cm_3_scaffold_5347_6
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4409..5440
DNA (1032bp) protein (344aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UIX9_MYXSD rbh
phospho-2-dehydro-3-deoxyheptonate aldolase
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta {ECO:0000313|EMBL:KFE64326.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; C
13_1_40cm_3_scaffold_5347_7
Slackia sp. CM382, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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5437..5718
DNA (282bp) protein (94aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Slackia sp. CM382 RepID=J5XYB6_9ACTN
3-phosphoshikimate 1-carboxyvinyltransferase
13_1_40cm_3_scaffold_5347_8
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

5720..6829
DNA (1110bp) protein (370aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RDE0_AMMDK
3-phosphoshikimate 1-carboxyvinyltransferase
13_1_40cm_3_scaffold_5347_9
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6829..9237
DNA (2409bp) protein (803aa)
Chorismate synthase {ECO:0000256|RuleBase:RU000605}; EC=4.2.3.5 {ECO:0000256|RuleBase:RU000605};; TaxID=334542 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source
Chorismate synthase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0X0_SORCE
chorismate synthase
13_1_40cm_3_scaffold_5347_10
S_OP1_64_32, KB1, Bacteria

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9224..10291
DNA (1068bp) protein (356aa)
3-dehydroquinate synthase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVD7_9BACT
3-dehydroquinate synthase Tax=S_OP1_64_32
3-dehydroquinate synthase
13_1_40cm_3_scaffold_5347_11
S_OP1_64_32, KB1, Bacteria

Not on your lists

10303..10725
DNA (423bp) protein (141aa)
3-dehydroquinate synthase Tax=S_OP1_64_32
3-dehydroquinate dehydratase id=3677719 bin=GWA2_Elusimicrobia_69_24 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
3-dehydroquinate dehydratase
13_1_40cm_3_scaffold_5347_12
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10722..11954
DNA (1233bp) protein (411aa)
Glycosyl transferase family 2 n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E306_9MICO
group 1 glycosyl transferase Tax=RBG_16_Anaeromyxobacter_69_14_curated
group 1 glycosyl transferase
13_1_40cm_3_scaffold_5347_13
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11961..12722)
DNA (762bp) protein (254aa)
tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=55779 species="Ba
Tryptophan synthase alpha chain n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIU0_MOOTA
13_1_40cm_3_scaffold_5347_14
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12719..13924)
DNA (1206bp) protein (402aa)
tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Tryptophan synthase beta chain n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H790_ANADF rbh
tryptophan synthase subunit beta
13_1_40cm_3_scaffold_5347_15
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14453..15190)
DNA (738bp) protein (246aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
indole-3-glycerol-phosphate synthase n=1 Tax=Longispora albida RepID=UPI00036A2A40
13_1_40cm_3_scaffold_5347_16
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(15187..16215)
DNA (1029bp) protein (343aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18) id=14626074 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
anthranilate phosphoribosyltransferase
13_1_40cm_3_scaffold_5347_17
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

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comp(16219..16404)
DNA (186bp) protein (62aa)
anthranilate synthase, component II (EC:4.1.3.27) Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
para-aminobenzoate synthase component II (EC:2.6.1.85) id=14629782 bin=bin8_Chloro species=Nocardia brasiliensis genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
anthranilate synthase, glutamine amidotransferase component
Displaying 17 items

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