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13_1_40cm_3_scaffold_5555

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5555_1
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(2..484)
DNA (483bp) protein (161aa)
ltd; L-threonine 3-dehydrogenase (EC:1.1.1.103)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000379555E
Tax=BJP_IG2158_Zixibacteria_48_33
13_1_40cm_3_scaffold_5555_2
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(575..1789)
DNA (1215bp) protein (405aa)
Major facilitator superfamily MFS_1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3X5_SPHTD
major facilitator superfamily protein
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_40cm_3_scaffold_5555_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1824..3149)
DNA (1326bp) protein (442aa)
MFS transporter n=1 Tax=Streptomyces sp. SS RepID=UPI0002F74C1F
Xanthine/uracil/vitamin C permease
Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:AHG93902.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_5555_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

3159..3563
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LRK7_HALO1
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein
13_1_40cm_3_scaffold_5555_5
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3648..4367
DNA (720bp) protein (240aa)
Arginyltransferase {ECO:0000256|SAAS:SAAS00194290}; EC=2.3.2.8 {ECO:0000256|SAAS:SAAS00194290};; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; M
Arginyl-tRNA-protein transferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U8B8_MYXSD
arginyl-tRNA-protein transferase
13_1_40cm_3_scaffold_5555_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4364..4780
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y1C2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36718.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_3_scaffold_5555_7
unknown

Not on your lists

4891..5379
DNA (489bp) protein (163aa)

This feature has no annotations

13_1_40cm_3_scaffold_5555_8
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5423..6049
DNA (627bp) protein (209aa)
Predicted Rossmann fold nucleotide-binding protein n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TVJ9_METKA
Uncharacterized protein {ECO:0000313|EMBL:AKB14481.1}; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina t
Rossmann fold nucleotide-binding protein
13_1_40cm_3_scaffold_5555_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6053..7603)
DNA (1551bp) protein (517aa)
FAD-dependent oxidoreductase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XMZ1_SORCE
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:AGP34542.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorang
13_1_40cm_3_scaffold_5555_10
unknown

Not on your lists

comp(7600..8673)
DNA (1074bp) protein (358aa)
hypothetical protein
13_1_40cm_3_scaffold_5555_11
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

8810..9814
DNA (1005bp) protein (335aa)
ligC; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_RIF_CHLX_72_14_curated
ATP dependent DNA ligase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHM0_ANADF
ligC; ATP-dependent DNA ligase
13_1_40cm_3_scaffold_5555_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9838..10842
DNA (1005bp) protein (335aa)
DNA primase small subunit Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
DNA primase small subunit id=4718007 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
DNA primase small subunit
13_1_40cm_3_scaffold_5555_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10862..11104)
DNA (243bp) protein (81aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y1Q7_9CLOT
13_1_40cm_3_scaffold_5555_14
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11101..13107)
DNA (2007bp) protein (669aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HC55_ANADF
ATP-dependent protease La
13_1_40cm_3_scaffold_5555_15
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

13594..13899
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECZ4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82556.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
phosphoglycolate phosphatase
13_1_40cm_3_scaffold_5555_16
unknown

Not on your lists

comp(13904..14125)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_3_scaffold_5555_17
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14110..15651)
DNA (1542bp) protein (514aa)
Di-/tripeptide transporter n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PHC4_9DELT rbh
Major facilitator transporter {ECO:0000313|EMBL:KFA90147.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sour
proton/peptide symporter family protein
13_1_40cm_3_scaffold_5555_18
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15750..16586
DNA (837bp) protein (279aa)
ATPase associated with various cellular activities, AAA_5 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q094M3_STIAD rbh
ATPase, AAA family {ECO:0000313|EMBL:AKF06388.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus
ATPase rbh
13_1_40cm_3_scaffold_5555_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16589..17719
DNA (1131bp) protein (377aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GNZ6_SORC5 rbh
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CAN96683.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;
13_1_40cm_3_scaffold_5555_20
unknown

Not on your lists

comp(18192..18629)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_3_scaffold_5555_21
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18626..20035)
DNA (1410bp) protein (470aa)
M20 family peptidase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N191_CORCM
Peptidase M20 {ECO:0000313|EMBL:KFA86796.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter
dapE1; M20 family peptidase
13_1_40cm_3_scaffold_5555_22
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20081..20662
DNA (582bp) protein (194aa)
rhomboid family protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
Rhomboid family membrane protein id=2306563 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rhomboid family protein
Displaying 22 items

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