ggKbase home page

13_1_40cm_3_scaffold_7298

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_7298_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..567)
DNA (567bp) protein (189aa)
Putative uncharacterized protein id=3917300 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_3_scaffold_7298_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(564..1580)
DNA (1017bp) protein (339aa)
radical SAM protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Fe-S protein, radical SAM family id=3818235 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
radical SAM domain-containing protein
13_1_40cm_3_scaffold_7298_3
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2184..3812
DNA (1629bp) protein (543aa)
Aspartate carbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000255|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000255|HAMAP-Rule:MF_00001}; Short=ATCase {ECO:0000255
Aspartate carbamoyltransferase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=PYRB_ANADF
pyrB; aspartate carbamoyltransferase catalytic subunit
13_1_40cm_3_scaffold_7298_4
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3809..5137
DNA (1329bp) protein (443aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1242864 species="
Dihydroorotase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QIC3_9DELT rbh
dihydroorotase, multifunctional complex type
13_1_40cm_3_scaffold_7298_5
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5134..6246
DNA (1113bp) protein (371aa)
carA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D6L7_MYXXD
13_1_40cm_3_scaffold_7298_6
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6243..6935
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C849_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI67001.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
13_1_40cm_3_scaffold_7298_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7004..8191)
DNA (1188bp) protein (396aa)
Deoxyhypusine synthase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QQ12_9DELT rbh
Deoxyhypusine synthase {ECO:0000313|EMBL:KFA89263.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cys
deoxyhypusine synthase
13_1_40cm_3_scaffold_7298_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8227..8595
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L9YS37_NATP1
Uncharacterized protein {ECO:0000313|EMBL:EYF06872.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
13_1_40cm_3_scaffold_7298_9
unknown

Not on your lists

8592..8894
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_3_scaffold_7298_10
unknown

Not on your lists

comp(8874..9137)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_3_scaffold_7298_11
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists

9186..9284
DNA (99bp) protein (33aa)
Tax=BJP_IG2158_Actinobacteria_57_21
Displaying 11 items

View Taxonomy