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13_1_40cm_3_scaffold_3305_22

Organism: 13_1_40CM_3_Deltaproteobacteria_69_14

partial RP 19 / 55 MC: 1 BSCG 19 / 51 MC: 1 ASCG 6 / 38
Location: 23227..24543

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase, SLT, LysM and LysM domain-containing; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 34.2
  • Coverage: 257.0
  • Bit_score: 130
  • Evalue 6.60e-27
Lytic transglycosylase, SLT, LysM and LysM domain-containing id=3722699 bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 34.5
  • Coverage: 223.0
  • Bit_score: 105
  • Evalue 1.20e-19
Lytic transglycosylase catalytic similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 218.0
  • Bit_score: 104
  • Evalue 1.00e-19

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Taxonomy

RifOxyA12_full_Deltaproteobacteria_61_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
ATGTCGCCAAAGGCGGTGATCCGGATCGGCCGGGGCCCGGACTGCGACGTACGCTTCGACGCGCAGCACGATACCAAGGTGTCGACGCATCACGCCGAGATCCGGTTCGAGAACGGGCTATACGTGGTGGTCGACGTGGGATCGACGAACGGTACCTTCGTCAACGGCAAGCTCGTGCGCGCTCACGAGCTGCGCTCGGGAGACAAGATCGTCTTCGGGGCGCAGGGCGGACCGGAGGTGCGGTTCGACATCGAAGAAGGCTTCGGCAACCTGCGCACCAACGGCATCGCCGAGCCGCTGCAGATGCCGATCGCGCGCAAGCCGCCGCCGGCGATCCCCCCTCCGACGCAGAGCGCGACGACGCTGGCCCGCGAGGCGCAGGTCAGGATCTCGCAGGCACGCGCGCGGTCGGGTGGACGGCCTTCCGGTCAGACGATGTTCATCATGGCCGACACCCTGAGGAAGGTGGAGGCCGTCACCCACCGCAGGGACCGCAAGAAGACCGCGGGGATCGTCTTGACCATCGTCGCGCTCTCGCTGGCCGGCTTCGTCGCGCTCGGGTTCGTGATCCAGCAGCAGAAGAAGCATATCGAGCAGATCCTCCACAAGAAGGACGGCCTGGACAAGCAGATCGCCAGGATCCAGCTCGACATGCAGATCACATCAGATCCCGACAAGCTGGCCTCGCTGGAAGATCAGCTCACCGCGCTCACCGGCAAAGCGCAGGACGCCATCGGGGAGCTGGCGAAGAAGGACAGGAGCGAAGCGCAGAAGCTCGAGGAGTCCGGCGACGAGCTGGATCGCGAGATCCGGCGCATCCTCGGCAAGTTCAACGCGCAGACGTACTTGGTGCCGCCCATCTTCAAGGCCCGGCTCAAGCACTACATCGACCGGATCGTCCGTCAGGCCGGCACGCGCGCGATCTACCGGCGCAAGCAGCAGTACTGGCCGCTGATCGTGAAGGAGTTCAGCGCCCTCGGTCTTCCGGAAGAAATGGGGTACGTGGCGTGGCAGGAGTCGGGCTTCGACCCGCTGGCGGAGAGCGGCGCGAAGGCCAGGGGGATGTGGCAGTTCATGGACTTCCGCGCCCGCGAGTTCGGCATGCGCGTGGACGCGAAGCGCGGCCTCGACGATCGCACCGACGTGCTGAAGAGCACCCACGCCGCCGCGCGCTACCTAGCGAATCTGCTCGCCGAGTTCGGCGAGGACTCCTTCATGCTCGCCATCGCCTCGTACAACAAGGGCGAGAACGGGATGCGCCGCGTGCTCCACGACCTCGCGCAGCAACCCGGCGGGTTTCGCAAGGACAAGCGCGAC
PROTEIN sequence
Length: 439
MSPKAVIRIGRGPDCDVRFDAQHDTKVSTHHAEIRFENGLYVVVDVGSTNGTFVNGKLVRAHELRSGDKIVFGAQGGPEVRFDIEEGFGNLRTNGIAEPLQMPIARKPPPAIPPPTQSATTLAREAQVRISQARARSGGRPSGQTMFIMADTLRKVEAVTHRRDRKKTAGIVLTIVALSLAGFVALGFVIQQQKKHIEQILHKKDGLDKQIARIQLDMQITSDPDKLASLEDQLTALTGKAQDAIGELAKKDRSEAQKLEESGDELDREIRRILGKFNAQTYLVPPIFKARLKHYIDRIVRQAGTRAIYRRKQQYWPLIVKEFSALGLPEEMGYVAWQESGFDPLAESGAKARGMWQFMDFRAREFGMRVDAKRGLDDRTDVLKSTHAAARYLANLLAEFGEDSFMLAIASYNKGENGMRRVLHDLAQQPGGFRKDKRD