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13_1_40cm_3_scaffold_3305

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3305_1
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..306
DNA (306bp) protein (102aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ABC79840.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ABC79840.1};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterine
Acetyl-CoA acetyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IM05_ANADE
13_1_40cm_3_scaffold_3305_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

317..1540
DNA (1224bp) protein (408aa)
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YAY6_SORCE
2-isopropylmalate synthase {ECO:0000313|EMBL:EYF03575.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chond
2-isopropylmalate synthase
13_1_40cm_3_scaffold_3305_3
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1537..1740
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MRM5_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE06912.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
13_1_40cm_3_scaffold_3305_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

1784..2509
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MRM4_CORCM
hypothetical protein
rhomboid family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_1_40cm_3_scaffold_3305_5
Ancylostoma ceylanicum, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(3096..4091)
DNA (996bp) protein (332aa)
PREDICTED: fibrous sheath CABYR-binding protein n=1 Tax=Microtus ochrogaster RepID=UPI00038BC143
Uncharacterized protein {ECO:0000313|EMBL:EYC18977.1}; TaxID=53326 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylost
hypothetical protein
13_1_40cm_3_scaffold_3305_6
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4196..6109
DNA (1914bp) protein (638aa)
UPF0313 protein AnaeK_0072 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UKM4_ANASK rbh
UPF0313 protein PSR1_04378 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobac
radical SAM protein
13_1_40cm_3_scaffold_3305_7
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6183..6563)
DNA (381bp) protein (127aa)
translation initiation factor IF-2 n=1 Tax=Streptomyces sp. CNS335 RepID=UPI000379F274
Translation initiation factor IF-2 {ECO:0000313|EMBL:AKH85157.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.
13_1_40cm_3_scaffold_3305_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6877..8046
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JHE0_9GAMM
parallel beta-helix repeat-containing protein
Parallel beta-helix repeat-containing protein {ECO:0000313|EMBL:AHG88112.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3305_9
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8056..8970)
DNA (915bp) protein (305aa)
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
DNA-formamidopyrimidine glycosylase {ECO:0000313|EMBL:ACG75243.1}; EC=3.2.2.23 {ECO:0000313|EMBL:ACG75243.1};; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystob
DNA-formamidopyrimidine glycosylase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGG1_ANASK
13_1_40cm_3_scaffold_3305_10
unknown

Not on your lists

comp(8985..9413)
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_40cm_3_scaffold_3305_11
GWA2_OP3_52_12_curated, Omnitrophica, Bacteria

Not on your lists

9423..10262
DNA (840bp) protein (280aa)
Putative uncharacterized protein id=4908172 bin=GWA2_OP3_52_12 species=Geitlerinema sp. PCC 7407 genus=Geitlerinema taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein Tax=GWA2_OP3_52_12_curated
hypothetical protein
13_1_40cm_3_scaffold_3305_12
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10311..11099
DNA (789bp) protein (263aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacte
DNA polymerase III, alpha subunit n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UBR4_ANASK
13_1_40cm_3_scaffold_3305_13
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11132..13786
DNA (2655bp) protein (885aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacter
DNA polymerase III alpha subunit n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QQE6_9DELT rbh
dnaE1; DNA polymerase III subunit alpha
13_1_40cm_3_scaffold_3305_14
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13949..15010)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7TZU0_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC41493.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
13_1_40cm_3_scaffold_3305_15
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15078..16112
DNA (1035bp) protein (345aa)
Threonine dehydratase n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WXC9_ACISM
threonine dehydratase
Threonine dehydratase {ECO:0000313|EMBL:ADW67462.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC B
13_1_40cm_3_scaffold_3305_16
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16366..19515
DNA (3150bp) protein (1050aa)
Carboxyl-terminal protease family protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D078_MYXXD
carboxyl-terminal protease
Carboxyl-terminal protease family protein {ECO:0000313|EMBL:ABF91432.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.
13_1_40cm_3_scaffold_3305_17
unknown

Not on your lists

comp(19576..20181)
DNA (606bp) protein (202aa)

This feature has no annotations

13_1_40cm_3_scaffold_3305_18
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20178..20741)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TYL8_9NOCA
pentapeptide repeat-containing protein Tax=CG_Delta_07
putative low-complexity protein
13_1_40cm_3_scaffold_3305_19
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(21179..22411)
DNA (1233bp) protein (411aa)
Tax=RBG_13_RIF03_48_7_curated
13_1_40cm_3_scaffold_3305_20
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22558..22959
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LX76_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY16118.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium
13_1_40cm_3_scaffold_3305_21
Treponema succinifaciens, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

22976..23182
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:AEB15508.1}; TaxID=869209 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema succinifaciens (strain ATCC 33096 /
13_1_40cm_3_scaffold_3305_22
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23227..24543
DNA (1317bp) protein (439aa)
lytic transglycosylase, SLT, LysM and LysM domain-containing; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
Lytic transglycosylase, SLT, LysM and LysM domain-containing id=3722699 bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Lytic transglycosylase catalytic
Displaying 22 items

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