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13_1_40cm_3_scaffold_4928_17

Organism: 13_1_40CM_3_Deltaproteobacteria_69_14

partial RP 19 / 55 MC: 1 BSCG 19 / 51 MC: 1 ASCG 6 / 38
Location: 18149..19591

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JDL7_ANAD2 similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 548.0
  • Bit_score: 372
  • Evalue 5.90e-100
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 548.0
  • Bit_score: 372
  • Evalue 1.70e-100
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cysto similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 548.0
  • Bit_score: 372
  • Evalue 8.30e-100

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Taxonomy

Anaeromyxobacter dehalogenans → Anaeromyxobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
ATGGCCGACAAGAAGTCCGCAGCCGCCCGCAAGAAGAACGCCCACAAGGCCGAGGCCAGGAAGGGCAAGCGCGCGAGGAAGGCTGCGCCAGAGCCGAAAAGCCACGCGAGGCCTGCGGGCAATGCGGAGGCGCCGGCCGCGAAAGTAAAGCGGGGCGAGAAGCAGAACGCGCCGAAGCAGGCGAAGAAGGCGGTCAAGGCAGGCGAGGAAGAGGGGGAGGCGGACGAGCTCGGGGAAGGCGTCGAGCCCGAGGCGGACCTCGCGCTGCCCGACGTCGGCGACGACGAGGAGCTCGCGGCGGACGCGGAGATCGACGAGGACGGCGACGAGGATCTCGCTCCCCCGAAGAAGGGCAGCAAGGCCACGGAGCGCAAGGAGGTGAAGGACCTGCTTGCACTCGGCCGCGACAAGGGGTTCCTCACCTACGACGAAGTCAACGACGCGCTGCCCTCCGACATCGTCTCCTCCGACCAGATCGACGACGTGATGTCGATGTTCGGGGACAACGACATCGCCATCGTCGACGAGGCCAACAAGGTCAAGCTTCCAGAGACCAAGCCGCCGGAGCCCGAGCCGGTGGCGGCGAAGGAAGAGGACCAGGCGACCCCCCAGGAAAAAGCCGAGCAGGAGGAGGAGGACGCCTACTCCAAGTCCAACGATCCGGTGCGCATGTACCTGCGCAAGATGGGCTCGGTCTCGCTGCTCACCCGCGAGGGCGAGGTGGAGATCGCCAAGCGGATCGAGGACGGCGAGAAGGAAGTGCTCGACGCCGTGCTCCACTCCAGCATCGCCATCAAGGAGATCATCCAGATCGGCGAGCGGCTGCGGAAGGGCAAGATGCGCGTGCGCGAGGTCATCCGCGATGCGCCGGACGAGGACGACGAGACGTTCGACGAGCAGGGACGCACCGACCAGGTGGTGAAGCTGATCGACAAGATCCGCCGGCTCGACCGCGAGAACGAGCACTTCACCGAGCTGATGACCTCGAAGACGCACAAGATCTCCGAGGGCAAGCGAAAGGAATACCGCGACGCCATCGCCCGCAACGAGGCGGCCATGGCGGAGACGCTCTCCGAGGTGAAGCTCAACAAGCGCCAGATCGAGCGCATCATCGAGAACCTCAAGAAGCTGATCGAGCGCGTCGACCAGGTCGAGCGGGAGATGCGCCACATCGAGCAGCGCCTCGGGGTGGGGCTCAAGGACCTCAAAGCGCTGCTCCGCGATGCCGAGGACGAGGGAAAGACGGGTCTCGGGGCGCGCAAGAAGCTGAAGGTGCTGGGGCTGTCGGAAGAAGAGGTGGGCGAGGTTGCCCGCGCCATCGCCGCGGCGCCCCGGAAGGTCAAGCGCGTCGAGGAGGAGGCGCTGCTTCCGCTCGACGAGCTCAAGCGCAGCTACGCGGCGATCATCGCCGGAGAGCGCAAGGCGGAGAAGGCCAAGGCGGAG
PROTEIN sequence
Length: 481
MADKKSAAARKKNAHKAEARKGKRARKAAPEPKSHARPAGNAEAPAAKVKRGEKQNAPKQAKKAVKAGEEEGEADELGEGVEPEADLALPDVGDDEELAADAEIDEDGDEDLAPPKKGSKATERKEVKDLLALGRDKGFLTYDEVNDALPSDIVSSDQIDDVMSMFGDNDIAIVDEANKVKLPETKPPEPEPVAAKEEDQATPQEKAEQEEEDAYSKSNDPVRMYLRKMGSVSLLTREGEVEIAKRIEDGEKEVLDAVLHSSIAIKEIIQIGERLRKGKMRVREVIRDAPDEDDETFDEQGRTDQVVKLIDKIRRLDRENEHFTELMTSKTHKISEGKRKEYRDAIARNEAAMAETLSEVKLNKRQIERIIENLKKLIERVDQVEREMRHIEQRLGVGLKDLKALLRDAEDEGKTGLGARKKLKVLGLSEEEVGEVARAIAAAPRKVKRVEEEALLPLDELKRSYAAIIAGERKAEKAKAE