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13_1_40cm_3_scaffold_4928

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4928_1
unknown

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comp(1..285)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_3_scaffold_4928_2
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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399..1520
DNA (1122bp) protein (374aa)
Permease YjgP/YjgQ n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKQ6_ANADE
permease YjgP/YjgQ
Permease YjgP/YjgQ {ECO:0000313|EMBL:ABC82235.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaerom
13_1_40cm_3_scaffold_4928_3
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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1517..2218
DNA (702bp) protein (234aa)
Polysaccharide deacetylase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5P7_SPHTD
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ACZ39449.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae;
13_1_40cm_3_scaffold_4928_4
unknown

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comp(2236..2451)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_3_scaffold_4928_5
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2451..3695)
DNA (1245bp) protein (415aa)
Transcription termination factor Rho n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INT3_ANADE rbh
rho; transcription termination factor Rho; K03628 transcription termination factor Rho Tax=GWA2_Deltaproteobacteria_45_12_curated
rho; transcription termination factor Rho
13_1_40cm_3_scaffold_4928_6
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3818..5809
DNA (1992bp) protein (664aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
DNA ligase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PIX2_9DELT rbh
NAD-dependent DNA ligase
13_1_40cm_3_scaffold_4928_7
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

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5806..6078
DNA (273bp) protein (91aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (st
hypothetical protein n=2 Tax=unclassified candidate division pSL4 RepID=UPI0003634384
acylphosphatase
13_1_40cm_3_scaffold_4928_8
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6154..6756
DNA (603bp) protein (201aa)
Radical SAM domain protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JD58_ANAD2
radical SAM protein
Uncharacterized protein {ECO:0000313|EMBL:GAO02535.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_40cm_3_scaffold_4928_9
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6804..8675
DNA (1872bp) protein (624aa)
Radical SAM domain protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JD58_ANAD2 rbh
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ACG71969.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;
13_1_40cm_3_scaffold_4928_10
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8672..9400
DNA (729bp) protein (243aa)
abortive infection protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B78D42
Uncharacterized protein {ECO:0000313|EMBL:KFN44769.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
CAAX amino terminal protease family
13_1_40cm_3_scaffold_4928_11
unknown

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9574..9885
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_40cm_3_scaffold_4928_12
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10221..13817
DNA (3597bp) protein (1199aa)
Ribonuclease, Rne/Rng family n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UDH9_ANASK rbh
ribonuclease, Rne/Rng family
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:ACG71970.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
13_1_40cm_3_scaffold_4928_13
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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13915..14250
DNA (336bp) protein (112aa)
Integration host factor subunit beta n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MMF1_CORCM
ihfB; integration host factor subunit beta
Integration host factor subunit beta {ECO:0000313|EMBL:AFE09120.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;
13_1_40cm_3_scaffold_4928_14
unknown

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14374..15513
DNA (1140bp) protein (380aa)

This feature has no annotations

13_1_40cm_3_scaffold_4928_15
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15842..16294
DNA (453bp) protein (151aa)
GatB/Yqey domain protein n=2 Tax=Myxococcus xanthus RepID=Q1D1W8_MYXXD
GatB/Yqey domain-containing protein
GatB/Yqey domain protein {ECO:0000313|EMBL:ABS24972.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_40cm_3_scaffold_4928_16
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17093..18061
DNA (969bp) protein (323aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=439235 species="Bacteria; Proteobacter
DNA primase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FBL4_DESAA
DNA primase
13_1_40cm_3_scaffold_4928_17
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18149..19591
DNA (1443bp) protein (481aa)
RNA polymerase sigma factor RpoD n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JDL7_ANAD2
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cysto
Displaying 17 items

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