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13_1_40cm_3_scaffold_1175

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1175_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(3..1304)
DNA (1302bp) protein (434aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] id=12556043 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Adenosylhomocysteinase
13_1_40cm_3_scaffold_1175_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1328..2272)
DNA (945bp) protein (315aa)
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Methyltransferase type 11
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator id=12556044 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_1175_3
unknown

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2300..2437
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_40cm_3_scaffold_1175_4

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2656..3465
DNA (810bp) protein (270aa)
Putative phosphatase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I576_CALAS
Marine sediment metagenome DNA, contig: S01H1_S20488 {ECO:0000313|EMBL:GAG16587.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
putative phosphatase
13_1_40cm_3_scaffold_1175_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3466..4203
DNA (738bp) protein (246aa)
Putative permease n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCV7_SINAD
permease
Putative permease {ECO:0000313|EMBL:AGA26476.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphil
13_1_40cm_3_scaffold_1175_6
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4388..5899)
DNA (1512bp) protein (504aa)
4-hydroxyphenylacetate 3-hydroxylase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SI15_THEM7
4-hydroxyphenylacetate 3-hydroxylase
4-hydroxyphenylacetate 3-hydroxylase {ECO:0000313|EMBL:ADU51895.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;"
13_1_40cm_3_scaffold_1175_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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6011..7105
DNA (1095bp) protein (365aa)
aroG; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
aroG; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K999_AZOSB
13_1_40cm_3_scaffold_1175_8
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7237..8136)
DNA (900bp) protein (300aa)
Dienelactone hydrolase family protein n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3U951_ADVKW
dienelactone hydrolase family protein
Dienelactone hydrolase {ECO:0000313|EMBL:ETF03360.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
13_1_40cm_3_scaffold_1175_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8241..9038)
DNA (798bp) protein (266aa)
short chain enoyl-CoA hydratase (EC:4.2.1.55)
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:CDM66921.1}; EC=4.2.1.55 {ECO:0000313|EMBL:CDM66921.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" so
Short chain enoyl-CoA hydratase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIZ6_CHLTF
13_1_40cm_3_scaffold_1175_10
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9042..10841
DNA (1800bp) protein (600aa)
feruloyl-CoA synthase; K12508 feruloyl-CoA synthase [EC:6.2.1.34] Tax=GWA2_Rhodocyclales_65_20_curated
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W5P6_MAGSA rbh
feruloyl-CoA synthase
13_1_40cm_3_scaffold_1175_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(11037..11840)
DNA (804bp) protein (268aa)
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_3_scaffold_1175_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

12283..12768
DNA (486bp) protein (162aa)
gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] id=24489189 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Serratia sp. DD3 genus=Serratia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
gamma-glutamyltranspeptidase
13_1_40cm_3_scaffold_1175_13
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(13215..13445)
DNA (231bp) protein (77aa)
membrane protein of unknown function; K08972 putative membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Putative uncharacterized protein id=1789186 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_3_scaffold_1175_14
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(13567..14331)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A39342
dienelactone hydrolase Tax=RBG_13_OP8X_37_8_curated
phospholipase/carboxylesterase
13_1_40cm_3_scaffold_1175_15
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14392..15267
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Treponema primitia RepID=UPI00025551E8
hypothetical protein Tax=RBG_13_Deltaproteobacteria_65_10_curated
drug/metabolite exporter
13_1_40cm_3_scaffold_1175_16
Komagataeibacter hansenii, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15277..16011)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Gluconacetobacter hansenii ATCC 23769 RepID=D5QDK8_GLUHA
Uncharacterized protein {ECO:0000313|EMBL:EFG84889.1}; TaxID=714995 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeiba
hypothetical protein
13_1_40cm_3_scaffold_1175_17
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(16008..16919)
DNA (912bp) protein (304aa)
beta-lactamase n=1 Tax=Thioalkalivibrio sp. AKL6 RepID=UPI00036B7063
metallo-beta-lactamase family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
metallo-beta-lactamase family protein
13_1_40cm_3_scaffold_1175_18
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(16924..17400)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036D1353
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
Displaying 18 items

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