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13_1_40cm_3_scaffold_11762

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_11762_1
unknown

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1..612
DNA (612bp) protein (204aa)

This feature has no annotations

13_1_40cm_3_scaffold_11762_2
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(952..1449)
DNA (498bp) protein (166aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQ22_SINAD
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Deltaproteobacteria_45_12_curated
sigma-70 family RNA polymerase sigma factor
13_1_40cm_3_scaffold_11762_3
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1551..3248)
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036178CC rbh
Repeat regulatory protein {ECO:0000313|EMBL:EMB18548.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula
hypothetical protein
13_1_40cm_3_scaffold_11762_4
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(4500..4787)
DNA (288bp) protein (96aa)
rbpA; RNA-binding protein Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
Putative RNA-binding protein id=2817745 bin=GWA1_Deltaproteobacteria_52_35 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
RNP-1 like RNA-binding protein
13_1_40cm_3_scaffold_11762_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5242..5544)
DNA (303bp) protein (101aa)
Heat shock protein 70 family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAU3_9BACT
Heat shock protein 70 family protein {ECO:0000313|EMBL:EEF63128.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;"
heat shock protein 70 family protein
13_1_40cm_3_scaffold_11762_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5636..7924)
DNA (2289bp) protein (763aa)
Heat shock protein 70 family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAU3_9BACT
Heat shock protein 70 family protein {ECO:0000313|EMBL:EEF63128.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;"
heat shock protein 70 family protein
13_1_40cm_3_scaffold_11762_7
Oikopleura dioica, Oikopleura, Appendicularia, Chordata, Metazoa

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comp(7914..9683)
DNA (1770bp) protein (590aa)
Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_242 n=1 Tax=Oikopleura dioica RepID=E4XWU5_OIKDI
Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_242 {ECO:0000313|EMBL:CBY14139.1}; TaxID=34765 species="Eukaryota; Metazoa; Chordata; Tunicata; Appendicularia; Oikopleuridae;
heat shock protein 70 family protein
13_1_40cm_3_scaffold_11762_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9680..10201)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAU1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63126.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
13_1_40cm_3_scaffold_11762_9
unknown

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10316..11101
DNA (786bp) protein (262aa)

This feature has no annotations

13_1_40cm_3_scaffold_11762_10
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11326..11682)
DNA (357bp) protein (119aa)
Large glycoprotein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08R52_STIAD
yfaS1; A-macroglobulin complement component Tax=RifOxyA12_full_Proteobacteria_58_15_curated
glycoprotein
Displaying 10 items

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