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13_1_40cm_3_scaffold_1250

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1250_1
unknown

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1..1257
DNA (1257bp) protein (419aa)

This feature has no annotations

13_1_40cm_3_scaffold_1250_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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1316..3754
DNA (2439bp) protein (813aa)
metal dependent phosphohydrolase (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
metal dependent phosphohydrolase (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] id=12555871 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UTP-GlnB (protein PII) uridylyltransferase, GlnD
13_1_40cm_3_scaffold_1250_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(3776..4108)
DNA (333bp) protein (111aa)
glnB; nitrogen regulatory protein P-II 1; K04751 nitrogen regulatory protein P-II 1 id=12555874 bin=CNBR_ACIDO species=Sphingobium sp. SYK-6 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
nitrogen regulatory protein P-II
13_1_40cm_3_scaffold_1250_4
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

Not on your lists

4407..6620
DNA (2214bp) protein (738aa)
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] Tax=RBG_16_Nitrospirae_43_11_curated
Glutamate-ammonia-ligase adenylyltransferase id=2199609 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
glutamate-ammonia-ligase adenylyltransferase
13_1_40cm_3_scaffold_1250_5
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(6670..7890)
DNA (1221bp) protein (407aa)
glnA; glutamine synthetase, type I, N-terminal (Glutamate--ammonia ligase I) (GSI) (EC:6.3.1.2)
glutamine synthetase n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000367E96D
glnA; glutamine synthetase Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
13_1_40cm_3_scaffold_1250_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

8630..9169
DNA (540bp) protein (180aa)
membrane protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein id=12554837 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_3_scaffold_1250_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9166..10035
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU87_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39563.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_3_scaffold_1250_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

10050..11150
DNA (1101bp) protein (367aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU86_KORVE
ABC efflux pump, inner membrane subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
efflux ABC transporter inner membrane protein
13_1_40cm_3_scaffold_1250_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11188..11928
DNA (741bp) protein (247aa)
ABC transporter, ATPase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT27_KORVE
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CDM64961.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyri
ABC transporter ATPase
13_1_40cm_3_scaffold_1250_10
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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11947..12273
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGX9_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11479.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
13_1_40cm_3_scaffold_1250_11
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

12283..12996
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q0E1_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_3_scaffold_1250_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(12986..13606)
DNA (621bp) protein (207aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
CDP-alcohol phosphatidyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RT8_SOLUE
CDP-alcohol phosphatidyltransferase
13_1_40cm_3_scaffold_1250_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13599..14078)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375767D
GreA/GreB family elongation factor
GreA/GreB family elongation factor {ECO:0000313|EMBL:ABF39557.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
13_1_40cm_3_scaffold_1250_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14088..15185)
DNA (1098bp) protein (366aa)
Mammalian cell entry related domain protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X0I0_ACISM
ABC-type transport system involved in resistance to organic solvents, periplasmic component {ECO:0000313|EMBL:CDM66174.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; P
hypothetical protein
13_1_40cm_3_scaffold_1250_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15236..16033)
DNA (798bp) protein (266aa)
ABC-type transport system involved in resistance to organic solvents, ATPase component n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF05_CHLTF
ABC-type transport system involved in resistance to organic solvents, ATPase component {ECO:0000313|EMBL:CDM66175.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrino
resistance to organic solvents ABC transporter ATPase
13_1_40cm_3_scaffold_1250_16
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(16030..16800)
DNA (771bp) protein (257aa)
transporter n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035CFFD9
hypothetical protein; K02066 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
transporter
13_1_40cm_3_scaffold_1250_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16843..18015
DNA (1173bp) protein (391aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDZ6_CHLTF rbh
13_1_40cm_3_scaffold_1250_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

18095..18574
DNA (480bp) protein (160aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
formylmethionine deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCK1_9BACT
13_1_40cm_3_scaffold_1250_19
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

18586..19587
DNA (1002bp) protein (334aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
methionyl-tRNA formyltransferase n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003619B16
methionyl-tRNA formyltransferase
13_1_40cm_3_scaffold_1250_20
unknown

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19591..19710
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 20 items

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