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13_1_40cm_3_scaffold_1126

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1126_1
unknown

Not on your lists

752..868
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_3_scaffold_1126_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1109..1921
DNA (813bp) protein (271aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPH4_SOLCM rbh
methylase involved in ubiquinone/menaquinone biosynthesis Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
methylase involved in ubiquinone/menaquinone biosynthesis
13_1_40cm_3_scaffold_1126_3
unknown

Not on your lists

2246..2455
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_3_scaffold_1126_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(2682..3476)
DNA (795bp) protein (265aa)
Periplasmic component of an ABC type amino acid transport system-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXY4_RAMTT
amino acid ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
amino acid ABC transporter substrate-binding protein
13_1_40cm_3_scaffold_1126_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

3542..4780
DNA (1239bp) protein (413aa)
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027N8_SOLUE
FMN-dependent alpha-hydroxy acid dehydrogenase
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:ABJ82769.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sou
13_1_40cm_3_scaffold_1126_6
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4847..5668
DNA (822bp) protein (274aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029F6_SOLUE
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_3_scaffold_1126_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5656..6258)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI0003707649
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_3_scaffold_1126_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(6248..6559)
DNA (312bp) protein (104aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBM9_GEOUR
fumarate reductase flavoprotein subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
13_1_40cm_3_scaffold_1126_9
unknown

Not on your lists

comp(6750..7013)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_3_scaffold_1126_10
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7023..7511)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PGQ1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX62256.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_1_40cm_3_scaffold_1126_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

7763..8863
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKX9_KORVE
peroxiredoxin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
thiol-disulfide isomerase
13_1_40cm_3_scaffold_1126_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

8860..9711
DNA (852bp) protein (284aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_3_scaffold_1126_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9715..11076)
DNA (1362bp) protein (454aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Aminopeptidase P n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILM5_KORVE
aminopeptidase P
13_1_40cm_3_scaffold_1126_14
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(11164..12354)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003735312
glycosyl transferase family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
glycosyl transferase, family 2
13_1_40cm_3_scaffold_1126_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(12372..13229)
DNA (858bp) protein (286aa)
4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
4-hydroxybenzoate polyprenyltransferase and related prenyltransferases n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D2A3_PELTS rbh
UbiA; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
13_1_40cm_3_scaffold_1126_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13271..14731
DNA (1461bp) protein (487aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS00_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40350.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_3_scaffold_1126_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

14821..15567
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS01_KORVE
hypothetical protein; K06898 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_3_scaffold_1126_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

15574..17934
DNA (2361bp) protein (787aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=234267 species="Bacteria; Acido
Endonuclease MutS2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P03_SOLUE
Smr protein/MutS2
13_1_40cm_3_scaffold_1126_19
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

18009..19742
DNA (1734bp) protein (578aa)
DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
DNA primase catalytic subunit (EC:2.7.7.-)
DNA primase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHR3_CHLTF
13_1_40cm_3_scaffold_1126_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

19785..21578
DNA (1794bp) protein (598aa)
RNA polymerase sigma factor SigA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIK4_KORVE
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sigma 38, RpoS
13_1_40cm_3_scaffold_1126_trna_1
unknown

Not on your lists

21660..21733
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_1126_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

21745..22476
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AV0_SOLUE
hypothetical protein; K07164 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_3_scaffold_1126_22
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

22477..22884
DNA (408bp) protein (136aa)
Ribonuclease H n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2S1_THEOJ
ribonuclease H
Ribonuclease H {ECO:0000313|EMBL:ADL07698.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;"
13_1_40cm_3_scaffold_1126_23
unknown

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23169..23246
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 24 items

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