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13_1_40cm_3_scaffold_2092

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2092_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(1..804)
DNA (804bp) protein (268aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJJ6_9CHLR
lipoyl synthase
13_1_40cm_3_scaffold_2092_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(801..2207)
DNA (1407bp) protein (469aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" sou
Dihydrolipoyl dehydrogenase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZU1_HERA2
dihydrolipoamide dehydrogenase
13_1_40cm_3_scaffold_2092_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2357..4594)
DNA (2238bp) protein (746aa)
Ribonuclease G and E {ECO:0000313|EMBL:CDM66092.1}; EC=3.1.26.- {ECO:0000313|EMBL:CDM66092.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrin
Ribonuclease, Rne/Rng family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YX3_SOLUE
ribonuclease
13_1_40cm_3_scaffold_2092_4
unknown

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4704..4943
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_3_scaffold_2092_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(4967..6070)
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000371C021
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rod shape-determining protein RodA
13_1_40cm_3_scaffold_2092_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(6219..8078)
DNA (1860bp) protein (620aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05515 penicillin-binding protein 2 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Penicillin-binding protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F7C8_ACIC5
penicillin-binding protein
13_1_40cm_3_scaffold_2092_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(8065..8586)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000376200D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40465.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_3_scaffold_2092_8
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8714..9577)
DNA (864bp) protein (288aa)
rod shape-determining protein; K03570 rod shape-determining protein MreC Tax=CG_Syntroph_01
Cell shape-determining protein MreC id=4409878 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
rod shape-determining protein MreC
13_1_40cm_3_scaffold_2092_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(9683..10708)
DNA (1026bp) protein (342aa)
Rod shape-determining protein MreB n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZY4_SOLUE
rod shape-determining protein MreB
Rod shape-determining protein MreB {ECO:0000313|EMBL:ABJ84781.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibac
13_1_40cm_3_scaffold_2092_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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10988..12913
DNA (1926bp) protein (642aa)
peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PpiC-type peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] id=12555487 bin=CNBR_ACIDO species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_40cm_3_scaffold_2092_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(13010..13936)
DNA (927bp) protein (309aa)
malate dehydrogenase (NAD); K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Malate dehydrogenase id=2897307 bin=GWF2_Syntrophobacterales_56_9 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
malate dehydrogenase
13_1_40cm_3_scaffold_2092_12
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

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comp(13937..15178)
DNA (1242bp) protein (414aa)
icd; isocitrate dehydrogenase, nADP-dependent; K00031 isocitrate dehydrogenase [EC:1.1.1.42] Tax=RBG_16_RIF03_38_11_curated
Isocitrate dehydrogenase [NADP] id=3661145 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes rbh
icd; isocitrate dehydrogenase, nADP-dependent
13_1_40cm_3_scaffold_2092_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(15286..17346)
DNA (2061bp) protein (687aa)
arginine decarboxylase (EC:4.1.1.19) rbh
Arginine decarboxylase {ECO:0000256|RuleBase:RU003740, ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|RuleBase:RU003740, ECO:0000256|SAAS:SAAS00212226};; TaxID=762570 species="Bacteria; Bact
Arginine decarboxylase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHS9_RHOMR rbh
13_1_40cm_3_scaffold_2092_14
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(17402..19204)
DNA (1803bp) protein (601aa)
Carbon starvation protein id=4998125 bin=GWA2_Ignavibacteria_55_11 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
carbon starvation protein CstA; K06200 carbon starvation protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
carbon starvation protein CstA
Displaying 14 items

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