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13_1_40cm_3_scaffold_28462

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_28462_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(2..712)
DNA (711bp) protein (237aa)
methylmalonyl-CoA mutase (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit id=5018848 bin=GWA2_Methylomirabilis_73_35 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_28462_2
unknown

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comp(841..930)
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_40cm_3_scaffold_28462_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(927..2345)
DNA (1419bp) protein (473aa)
phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate--CoA ligase id=4257368 bin=GWF2_Methylomirabilis_70_14 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_28462_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(2367..2795)
DNA (429bp) protein (143aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Cobalamin B12-binding domain protein id=4257370 bin=GWF2_Methylomirabilis_70_14 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methylmalonyl-CoA mutase-like protein
13_1_40cm_3_scaffold_28462_5
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2800..4896)
DNA (2097bp) protein (699aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00037D17E1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
13_1_40cm_3_scaffold_28462_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(4947..5705)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003680020
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_3_scaffold_28462_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(5733..6422)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003680020
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_3_scaffold_28462_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(6536..7276)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003680020
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_3_scaffold_28462_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

7444..8718
DNA (1275bp) protein (425aa)
polyvinyl-alcohol dehydrogenase (EC:1.1.2.6); K05889 polyvinyl alcohol dehydrogenase (cytochrome) [EC:1.1.2.6] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Polyvinyl-alcohol dehydrogenase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D3P4_BRAJP
cytochrome Cbb3
Displaying 9 items

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