ggKbase home page

13_1_40cm_3_scaffold_3168

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3168_1
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6..977)
DNA (972bp) protein (324aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:AEI50166.1}; EC=4.3.1.12 {ECO:0000313|EMBL:AEI50166.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" s
Ornithine cyclodeaminase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EM66_RUNSL
ornithine cyclodeaminase
13_1_40cm_3_scaffold_3168_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(955..2064)
DNA (1110bp) protein (370aa)
UvrABC system protein C n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=UVRC_ANASK
UvrB/UvrC protein
UvrB/UvrC protein {ECO:0000313|EMBL:ABJ88208.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (str
13_1_40cm_3_scaffold_3168_3
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2076..2507)
DNA (432bp) protein (144aa)
Putative esterase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMS4_KORVE
esterase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
esterase
13_1_40cm_3_scaffold_3168_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2934..3311)
DNA (378bp) protein (126aa)
Alkylhydroperoxidase AhpD family core domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK93_CHLTF
alkylhydroperoxidase AhpD family core domain-containing protein Tax=RBG_16_Acidobacteria_70_10_curated
alkylhydroperoxidase AhpD family core domain-containing protein
13_1_40cm_3_scaffold_3168_5
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3596..4351)
DNA (756bp) protein (252aa)
Metal-dependent phosphohydrolase, HD protein n=1 Tax=uncultured bacterium RepID=K2BKQ1_9BACT
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
metal dependent phosphohydrolase
13_1_40cm_3_scaffold_3168_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

4451..5833
DNA (1383bp) protein (461aa)
Beta-lactamase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q87_SOLUE rbh
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABJ88183.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter u
13_1_40cm_3_scaffold_3168_7
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

5869..6141
DNA (273bp) protein (91aa)
Acylphosphatase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B5M4_TURPD
Acylphosphatase
Acylphosphatase {ECO:0000313|EMBL:AFM12581.1}; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC BAA-1111 / DSM 21527 /
13_1_40cm_3_scaffold_3168_8
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

6143..6658
DNA (516bp) protein (172aa)
adenine phosphoribosyltransferase (EC:2.4.2.7) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK20_CHLTF
13_1_40cm_3_scaffold_3168_9
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

6777..9230
DNA (2454bp) protein (818aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_3_scaffold_3168_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9244..10563
DNA (1320bp) protein (440aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 70 RepID=E3T6J2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_3_scaffold_3168_11
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

10574..11971
DNA (1398bp) protein (466aa)
Ankyrin 23/unc44-like protein n=1 Tax=uncultured bacterium 70 RepID=E3T6J4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_3_scaffold_3168_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12030..13103)
DNA (1074bp) protein (358aa)
hypothetical protein, partial n=2 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000375419C
Uncharacterized protein {ECO:0000313|EMBL:ETX07127.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
methionine synthase, vitamin-B12 independent
13_1_40cm_3_scaffold_3168_13
unknown

Not on your lists

13986..14162
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_3_scaffold_3168_14
unknown

Not on your lists

14928..15170
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_3_scaffold_3168_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

15193..15342
DNA (150bp) protein (50aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036BF7E4
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_40cm_3_scaffold_3168_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15511..16569
DNA (1059bp) protein (353aa)
putative type I restriction system, N-6 adenine-specific DNA methylase HsdM (EC:2.1.1.72)
Putative Type I restriction system, N-6 adenine-specific DNA methylase HsdM {ECO:0000313|EMBL:CBK41624.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CBK41624.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitr
Putative Type I restriction system, N-6 adenine-specific DNA methylase HsdM n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEG5_9BACT
13_1_40cm_3_scaffold_3168_17
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

16536..17237
DNA (702bp) protein (234aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
restriction endonuclease subunit S n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B4EEC3
N-6 DNA methylase
Displaying 17 items

View Taxonomy