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13_1_40cm_3_scaffold_401

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_401_1
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..291)
DNA (291bp) protein (97aa)
queF; NADPH-dependent 7-cyano-7-deazaguanine reductase (EC:1.7.1.13); K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=RBG_13_Deltaproteobacteria_52_11b_curated
queF; NADPH-dependent 7-cyano-7-deazaguanine reductase (EC:1.7.1.13)
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBH8_9BACT
13_1_40cm_3_scaffold_401_2
Microgenomates bacterium GW2011_GWC1_39_7, Microgenomates, Bacteria

Not on your lists

663..1310
DNA (648bp) protein (216aa)
DSBA oxidoreductase {ECO:0000313|EMBL:KKR25550.1}; TaxID=1618515 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_7.;"
dsbG; protein-disulfide isomerase id=4988 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Protein-disulfide isomerase
13_1_40cm_3_scaffold_401_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1559..2728)
DNA (1170bp) protein (390aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
Dehydrogenase E1 component n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIR5_RHOM4
dehydrogenase E1 component
13_1_40cm_3_scaffold_401_4
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2943..3377
DNA (435bp) protein (145aa)
Putative cytochrome c-type biogenesis protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V4U1_TERSS
putative cytochrome c-type biogenesis protein
Putative cytochrome c-type biogenesis protein {ECO:0000313|EMBL:ADV82569.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" sourc
13_1_40cm_3_scaffold_401_5
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

3379..5415
DNA (2037bp) protein (679aa)
Cytochrome c assembly protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YS1_SOLUE rbh
cytochrome c assembly protein; K02198 cytochrome c-type biogenesis protein CcmF Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
cytochrome c assembly protein
13_1_40cm_3_scaffold_401_6
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

5768..6058
DNA (291bp) protein (97aa)
hypothetical protein; K02200 cytochrome c-type biogenesis protein CcmH Tax=RBG_16_Chloroflexi_58_8_curated
Cytochrome c-type biogenesis protein cycL id=4062401 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytochrome C biogenesis protein
13_1_40cm_3_scaffold_401_7
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

6058..6474
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NT61_GRAMM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_3_scaffold_401_8
unknown

Not on your lists

6474..6809
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_3_scaffold_401_9
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6966..7682
DNA (717bp) protein (239aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E7E8_9ACTN
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBL03645.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" s
13_1_40cm_3_scaffold_401_10
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

7679..8344
DNA (666bp) protein (222aa)
Cytochrome c-type biogenesis protein CcmB n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TFT5_CALNY
ccmB; heme exporter protein CcmB; K02194 heme exporter protein B Tax=RBG_16_Acidobacteria_68_9_curated
cytochrome c-type biogenesis protein ccmb
13_1_40cm_3_scaffold_401_11
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

8346..9014
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI000367FDAE
cytochrome c assembly protein; K02195 heme exporter protein C Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
cytochrome c assembly protein
13_1_40cm_3_scaffold_401_12

Not on your lists

comp(9364..9945)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BLR3 RepID=C0IN63_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACN58749.1}; TaxID=506521 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR3.;"
13_1_40cm_3_scaffold_401_13

Not on your lists

comp(9963..10484)
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BLR3 RepID=C0IN62_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACN58748.1}; TaxID=506521 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR3.;"
13_1_40cm_3_scaffold_401_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(10910..11551)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D2D251
polysaccharide deacetylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
polysaccharide deacetylase
13_1_40cm_3_scaffold_401_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(11572..11829)
DNA (258bp) protein (86aa)
polysaccharide deacetylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_1_40cm_3_scaffold_401_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(11878..12630)
DNA (753bp) protein (251aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein id=12554596 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_3_scaffold_401_17
unknown

Not on your lists

comp(12947..13267)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_3_scaffold_401_18
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

comp(13284..13799)
DNA (516bp) protein (172aa)
adenylate cyclase; K05873 adenylate cyclase, class 2 [EC:4.6.1.1] id=16973968 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
adenylate cyclase; K05873 adenylate cyclase, class 2 [EC:4.6.1.1] Tax=RBG_13_Aminicenantes_62_12_curated
putative adenylate cyclase (EC:4.6.1.1)
13_1_40cm_3_scaffold_401_19

Not on your lists

comp(13786..14337)
DNA (552bp) protein (184aa)
Appr-1-p processing domain protein n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V7J1_THELD
Marine sediment metagenome DNA, contig: S01H1_L07913 {ECO:0000313|EMBL:GAF78860.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Appr-1-p processing protein
13_1_40cm_3_scaffold_401_20
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

14361..15245
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=unclassified Opitutaceae RepID=I6AQV2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIP97393.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
13_1_40cm_3_scaffold_401_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15242..16552
DNA (1311bp) protein (437aa)
Thymidine phosphorylase {ECO:0000313|EMBL:CDM65503.1}; EC=2.4.2.4 {ECO:0000313|EMBL:CDM65503.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyr
Pyrimidine-nucleoside phosphorylase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H829_ANADF
pyrimidine-nucleoside phosphorylase
13_1_40cm_3_scaffold_401_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16555..17376
DNA (822bp) protein (274aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=454194 species="Bac
Purine nucleoside phosphorylase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRS4_ACEAZ
purine nucleoside phosphorylase
13_1_40cm_3_scaffold_401_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

17366..17764
DNA (399bp) protein (133aa)
cytidine deaminase (EC:3.5.4.5); K01489 cytidine deaminase [EC:3.5.4.5] id=12555474 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase {ECO:0000313|EMBL:ABJ86187.1}; EC=3.5.4.5 {ECO:0000313|EMBL:ABJ86187.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibactera
13_1_40cm_3_scaffold_401_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17815..18336)
DNA (522bp) protein (174aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] Tax=RBG_16_Actinobacteria_68_12_curated
hprT; hypoxanthine-guanine phosphoribosyltransferase (HGPRTase) (HGPRT) (EC:2.4.2.8) id=14632559 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
13_1_40cm_3_scaffold_401_25
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(18664..19677)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML44_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69886.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_3_scaffold_401_26
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

19707..20630
DNA (924bp) protein (308aa)
Glucose kinase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5S9F8_9BACT
Glucose kinase {ECO:0000313|EMBL:BAL52794.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
Transcriptional regulator/sugar kinase
13_1_40cm_3_scaffold_401_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

20630..22450
DNA (1821bp) protein (607aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJK0_9BACT rbh
GTP-binding protein LepA
13_1_40cm_3_scaffold_401_28
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22524..24680
DNA (2157bp) protein (719aa)
Penicillin-binding protein 1A {ECO:0000313|EMBL:ABF43231.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABF43231.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus
Penicillin-binding protein 1A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIR9_KORVE
penicillin-binding protein 1A
13_1_40cm_3_scaffold_401_29
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

24677..25189
DNA (513bp) protein (171aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
13_1_40cm_3_scaffold_401_30
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

25189..26049
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00037167E0
BadF/BadG/BcrA/BcrD type ATPase
ATPase BadF/BadG/BcrA/BcrD type {ECO:0000313|EMBL:ADE53695.1}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarit
Displaying items 1-30 of 36 in total

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