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13_1_40cm_3_scaffold_502

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_502_1
unknown

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comp(3..539)
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_40cm_3_scaffold_502_2
Pseudomonas sp. G5(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2095..2475
DNA (381bp) protein (127aa)
PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Pseudomonas sp. G5(2012) RepID=S2ELG2_9PSED
PQQ-dependent dehydrogenase, methanol/ethanol family {ECO:0000313|EMBL:EPA92548.1}; TaxID=1268068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
methanol/ethanol family PQQ-dependent dehydrogenase
13_1_40cm_3_scaffold_502_3
unknown

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2666..2848
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_3_scaffold_502_4
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

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comp(3112..4182)
DNA (1071bp) protein (357aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodopirellula baltica SH28 RepID=K5DLR2_RHOBT
hypothetical protein Tax=RIFOXYA2_FULL_RIF01_40_8_curated
RNA polymerase, sigma-24 subunit, ECF subfamily-like hypothetical protein
13_1_40cm_3_scaffold_502_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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4288..5997
DNA (1710bp) protein (570aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000360AD2D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41950.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_3_scaffold_502_6

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6088..7320
DNA (1233bp) protein (411aa)
Putative peptidase family M23/M37 n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC89_9ZZZZ
Putative peptidase family M23/M37 {ECO:0000313|EMBL:ABZ10198.1}; TaxID=455560 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG10H12.;"
peptidoglycan-specific endopeptidase, M23 family
13_1_40cm_3_scaffold_502_7
unknown

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comp(7361..7846)
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_40cm_3_scaffold_502_8
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(7962..9977)
DNA (2016bp) protein (672aa)
Thioredoxin domain containing protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGW5_CHLTF
thioredoxin domain-containing protein
Thioredoxin domain containing protein {ECO:0000313|EMBL:AEP11465.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium ther
13_1_40cm_3_scaffold_502_9
unknown

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10078..10257
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_3_scaffold_502_10
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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10346..11878
DNA (1533bp) protein (511aa)
single-stranded nucleic acid binding R3H domain-containing protein id=14633013 bin=bin9_gal15 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
single-stranded nucleic acid binding R3H domain-containing protein Tax=CSP1_3_Armatimonadetes
single-stranded nucleic acid binding R3H domain-containing protein
13_1_40cm_3_scaffold_502_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(11947..12696)
DNA (750bp) protein (250aa)
PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like n=1 Tax=Ceratitis capitata RepID=UPI000329B953
Uncharacterized protein {ECO:0000313|EMBL:CDM66681.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
short-chain dehydrogenase/reductase SDR
13_1_40cm_3_scaffold_502_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(12698..14293)
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000382E893
serine/threonine protein kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
tolB protein
13_1_40cm_3_scaffold_502_13
unknown

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14655..14861
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_3_scaffold_502_14
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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14968..15582
DNA (615bp) protein (205aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527};; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellale
Putative 3-methyladenine DNA glycosylase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YUI3_METPS
putative 3-methyladenine DNA glycosylase
13_1_40cm_3_scaffold_502_15
unknown

Not on your lists

15579..16829
DNA (1251bp) protein (417aa)

This feature has no annotations

13_1_40cm_3_scaffold_502_16
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

16873..18735
DNA (1863bp) protein (621aa)
UvrABC system protein C n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=UVRC_SOLUE
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
uvrC; excinuclease ABC subunit C
Displaying 16 items

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