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13_1_40cm_3_scaffold_5457

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5457_1
unknown

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comp(1..246)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_3_scaffold_5457_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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456..2456
DNA (2001bp) protein (667aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMU1_9BACT rbh
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:CBE68041.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus M
13_1_40cm_3_scaffold_5457_3
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

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2655..4253
DNA (1599bp) protein (533aa)
Thiamine pyrophosphate enzyme domain protein TPP-binding n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMU2_9BACT
thiamine pyrophosphate enzyme domain protein TPP-binding Tax=RBG_16_Planctomycetes_43_13_curated
thiamine pyrophosphate enzyme domain protein TPP-binding
13_1_40cm_3_scaffold_5457_4
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

4673..5215
DNA (543bp) protein (181aa)
ornithine cyclodeaminase; K01750 ornithine cyclodeaminase [EC:4.3.1.12] Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
ornithine cyclodeaminase; K01750 ornithine cyclodeaminase [EC:4.3.1.12] id=14425311 bin=bin1_lowGC species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ornithine cyclodeaminase (EC:4.3.1.12)
13_1_40cm_3_scaffold_5457_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(5234..6439)
DNA (1206bp) protein (402aa)
paaK; phenylacetate-CoA ligase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Phenylacetate-CoA ligase id=1863431 bin=GWD2_Deltaproteobacteria_55_8 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
paaK; phenylacetate-CoA ligase
13_1_40cm_3_scaffold_5457_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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6532..7287
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023G5_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83881.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_3_scaffold_5457_7

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comp(7302..8636)
DNA (1335bp) protein (445aa)
Sulfatase n=1 Tax=uncultured bacterium 213 RepID=E3T6X6_9BACT
Sulfatase {ECO:0000313|EMBL:ADC36070.1}; TaxID=698383 species="Bacteria; environmental samples.;" source="uncultured bacterium 213.;"
sulfatase
13_1_40cm_3_scaffold_5457_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(8656..9864)
DNA (1209bp) protein (403aa)
Calcium-binding EF-hand-containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025F7_SOLUE
calcium-binding EF-hand-containing protein
Calcium-binding EF-hand-containing protein {ECO:0000313|EMBL:ABJ83362.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus So
13_1_40cm_3_scaffold_5457_9
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10039..10647)
DNA (609bp) protein (203aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=2 Tax=Marinobacter RepID=E4PPM1_MARAH
methionine sulfoxide reductase A
13_1_40cm_3_scaffold_5457_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(10729..11715)
DNA (987bp) protein (329aa)
UniRef90_D6U5B8 Molybdopterin dehydrogenase FAD-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B8_9CHLR id=1247860 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_1_40cm_3_scaffold_5457_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(11743..14184)
DNA (2442bp) protein (814aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein id=14627888 bin=bin7_NC10_sister species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_1_40cm_3_scaffold_5457_12
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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comp(14171..14719)
DNA (549bp) protein (183aa)
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
(2Fe-2S)-binding domain protein id=3729521 bin=GWF2_Methylomirabilis_70_14 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
13_1_40cm_3_scaffold_5457_13
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14743..15540
DNA (798bp) protein (266aa)
Putative TauD/TfdA family dioxygenase {ECO:0000313|EMBL:CCE05998.1}; EC=1.14.11.17 {ECO:0000313|EMBL:CCE05998.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bra
TauD/TfdA family dioxygenase (EC:1.14.11.17)
Putative TauD/TfdA family dioxygenase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0THR0_9BRAD
13_1_40cm_3_scaffold_5457_14
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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15641..16273
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI000377BBE0
Restriction endonuclease {ECO:0000313|EMBL:KJU87025.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium ba
hypothetical protein
13_1_40cm_3_scaffold_5457_15
unknown

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comp(16433..16675)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_3_scaffold_5457_16
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

16774..17535
DNA (762bp) protein (254aa)
Coenzyme A transferase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VPG1_9EURY
acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit
13_1_40cm_3_scaffold_5457_17
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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17554..18555
DNA (1002bp) protein (334aa)
N5N10-methylenetetrahydromethanopterin reductase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
N5N10-methylenetetrahydromethanopterin reductase id=1857232 bin=GWD2_Deltaproteobacteria_55_8 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
N5N10-methylenetetrahydromethanopterin reductase
13_1_40cm_3_scaffold_5457_18
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

18567..19580
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRB6_9FIRM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_3_scaffold_5457_19
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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19665..20462
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA97_CONWI
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein
13_1_40cm_3_scaffold_5457_20
unknown

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comp(20638..20853)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_3_scaffold_5457_21
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(21234..21767)
DNA (534bp) protein (178aa)
Cytochrome c n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4T1_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:AKF84999.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
cytochrome c
13_1_40cm_3_scaffold_5457_22
unknown

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comp(21993..22262)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_3_scaffold_5457_23
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22249..22764)
DNA (516bp) protein (172aa)
superoxide dismutase (EC:1.15.1.1) Tax=RBG_13_Deltaproteobacteria_65_10_curated
sodA; superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1ENV9_9MICO
13_1_40cm_3_scaffold_5457_24
unknown

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22945..23754
DNA (810bp) protein (270aa)

This feature has no annotations

13_1_40cm_3_scaffold_5457_25

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comp(23894..24499)
DNA (606bp) protein (202aa)
Marine sediment metagenome DNA, contig: S01H4_S05089 {ECO:0000313|EMBL:GAH01546.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_3_scaffold_5457_26
unknown

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24979..25182
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_3_scaffold_5457_27
unknown

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comp(25528..25833)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_3_scaffold_5457_28
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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26154..26894
DNA (741bp) protein (247aa)
protease Do (EC:3.4.21.108)
Protease Do n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQU7_HYPDA
PDZ/DHR/GLGF Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_40cm_3_scaffold_5457_29
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

27052..27534
DNA (483bp) protein (161aa)
Type II and III secretion system protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM5_KORVE
type II and III secretion system protein; K02666 type IV pilus assembly protein PilQ Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
type II and III secretion system protein
13_1_40cm_3_scaffold_5457_30
R_NC10_66_22, NC10, Bacteria

Not on your lists

27627..28325
DNA (699bp) protein (233aa)
type 12 methyltransferase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0002481B7E
type 12 methyltransferase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Methyltransferase type 12
Displaying 30 items

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