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13_1_40cm_3_scaffold_614

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_614_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..486)
DNA (486bp) protein (162aa)
hypothetical protein id=12556448 bin=CNBR_ACIDO species=Pseudomonas sp. K-62 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:EKS31773.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
13_1_40cm_3_scaffold_614_2
Pseudomonas sp. K-62, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(483..1118)
DNA (636bp) protein (212aa)
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12556447 bin=CNBR_ACIDO species=Pseudomonas sp. K-62 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNA polymerase sigma factor {ECO:0000313|EMBL:BAM13981.1}; TaxID=76885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp.
RNA polymerase sigma factor
13_1_40cm_3_scaffold_614_3
unknown

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1217..1405
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_3_scaffold_614_4
unknown

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1428..2015
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_40cm_3_scaffold_614_5
unknown

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2279..2560
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_3_scaffold_614_6
unknown

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2771..2911
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_3_scaffold_614_7
unknown

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3389..3778
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_3_scaffold_614_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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3778..4389
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D644_9BURK
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
two component LuxR family transcriptional regulator
13_1_40cm_3_scaffold_614_9
unknown

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comp(4312..4704)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_3_scaffold_614_10
unknown

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comp(4847..4981)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_3_scaffold_614_11
unknown

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comp(4995..5279)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_3_scaffold_614_12
unknown

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5589..6443
DNA (855bp) protein (285aa)

This feature has no annotations

13_1_40cm_3_scaffold_614_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(7008..7604)
DNA (597bp) protein (199aa)
Alkaline phosphatase, DedA family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A26_SOLUE
alkaline phosphatase
Alkaline phosphatase, DedA family {ECO:0000313|EMBL:ABJ82100.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibact
13_1_40cm_3_scaffold_614_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(7671..10040)
DNA (2370bp) protein (790aa)
AMP-binding enzyme; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=12556744 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
AMP-dependent synthetase/ligase
13_1_40cm_3_scaffold_614_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10113..11081
DNA (969bp) protein (323aa)
ATPase associated with various cellular activities, AAA_3 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B73_SOLUE
ATPase
ATPase associated with various cellular activities, AAA_3 {ECO:0000313|EMBL:ABJ81693.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Soliba
13_1_40cm_3_scaffold_614_16
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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11133..12302
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NI4_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_1_40cm_3_scaffold_614_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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12445..14547
DNA (2103bp) protein (701aa)
Transglutaminase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPQ3_KORVE
transglutaminase-like Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
transglutaminase
13_1_40cm_3_scaffold_614_18
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

14620..15981
DNA (1362bp) protein (454aa)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2U6_9BACT
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
30S ribosomal protein S12P methylthiotransferase
13_1_40cm_3_scaffold_614_19
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16138..16644
DNA (507bp) protein (169aa)
phosphatidylglycerophosphatase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B6164A
phosphatidylglycerophosphatase A
Phosphatidylglycerophosphatase A {ECO:0000313|EMBL:EFI03650.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14
13_1_40cm_3_scaffold_614_20
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

16647..17669
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000370E5F9
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_3_scaffold_614_21
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

17894..19138
DNA (1245bp) protein (415aa)
CinA-like protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJA0_CHLTF rbh
competence/damage-inducible protein cinA; K03742 competence/damage-inducible protein CinA Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
competence/damage-inducible protein CinA C-terminal domain-containing protein
13_1_40cm_3_scaffold_614_22
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19138..19680
DNA (543bp) protein (181aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RBG_13_Deltaproteobacteria_53_10_curated
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003815F56
2'-5' RNA ligase
13_1_40cm_3_scaffold_614_23
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

19677..20675
DNA (999bp) protein (333aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFV8_9BACT
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
13_1_40cm_3_scaffold_614_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

20687..21643
DNA (957bp) protein (319aa)
cell division protein FtsY n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371D203 rbh
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibac
Displaying 24 items

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