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13_1_40cm_3_scaffold_60

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_60_1
unknown

Not on your lists

37..396
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_3_scaffold_60_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(430..2196)
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PH36_9BURK rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
conserved hypothetical protein
13_1_40cm_3_scaffold_60_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2210..2575)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037A63AE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41686.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_3_scaffold_60_4

Not on your lists

2606..3604
DNA (999bp) protein (333aa)
argE; acetylornithine deacetylase (EC:3.5.1.16) id=24403765 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Uncharacterized protein {ECO:0000313|EMBL:KKM99834.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
peptidase dimerization domain-containing protein
13_1_40cm_3_scaffold_60_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

3601..4311
DNA (711bp) protein (237aa)
Dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI00036870DA
Dihydrodipicolinate reductase
13_1_40cm_3_scaffold_60_6
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4338..5243
DNA (906bp) protein (302aa)
Dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=GWA2_Ignavibacteria_54_16_curated
Dihydrodipicolinate synthase id=3467319 bin=GWC2_Proteo_65_14_Ab886 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
dihydrodipicolinate synthase
13_1_40cm_3_scaffold_60_7
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5240..6085
DNA (846bp) protein (282aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117); K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117] Tax=GWA2_Ignavibacteria_54_1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIY0_RHOMR
13_1_40cm_3_scaffold_60_8
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6201..7511)
DNA (1311bp) protein (437aa)
CBS domain-containing protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8L3Y4_9SYNC
Uncharacterized protein {ECO:0000313|EMBL:KJH70778.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
hypothetical protein
13_1_40cm_3_scaffold_60_9
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(7579..8556)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZGU1_METPB
hypothetical protein Tax=RBG_13_RIF03_48_7_curated
hypothetical protein
13_1_40cm_3_scaffold_60_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8553..9797)
DNA (1245bp) protein (415aa)
cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC:2.5.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
cofH1; FO synthase subunit 2 (EC:2.5.1.-)
FO synthase subunit 2 id=4828264 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_3_scaffold_60_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9794..10912)
DNA (1119bp) protein (373aa)
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EHA9_9CHLR
FO synthase {ECO:0000313|EMBL:ETX05260.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
cofG; FO synthase subunit 1
13_1_40cm_3_scaffold_60_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10949..13228)
DNA (2280bp) protein (760aa)
Putative phytochrome sensor protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UA81_METS4
putative phytochrome sensor protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative phytochrome sensor protein
13_1_40cm_3_scaffold_60_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13338..13694
DNA (357bp) protein (119aa)
mannose-6-phosphate isomerase (EC:5.3.1.8)
Smu11C n=1 Tax=uncultured organism RepID=Q0GNJ9_9ZZZZ
Mannose-6-phosphate isomerase, type 2 {ECO:0000313|EMBL:CDM65546.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.
13_1_40cm_3_scaffold_60_14
unknown

Not on your lists

13772..13987
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_3_scaffold_60_15
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(13996..14733)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NJ4_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
13_1_40cm_3_scaffold_60_16
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

14747..16291
DNA (1545bp) protein (515aa)
Fis family transcriptional regulator id=14425782 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Fis family transcriptional regulator Tax=CSP1_2_Dadabacteria
Fis family transcriptional regulator
13_1_40cm_3_scaffold_60_17
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

16297..17271
DNA (975bp) protein (325aa)
D-isomer specific 2-hydroxyacid dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding id=3830373 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
D-isomer specific 2-hydroxyacid dehydrogenase
13_1_40cm_3_scaffold_60_18
unknown

Not on your lists

comp(17274..17741)
DNA (468bp) protein (156aa)

This feature has no annotations

13_1_40cm_3_scaffold_60_19
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17829..18464
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2L6A5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL87820.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" sour
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_3_scaffold_60_20
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18484..20316
DNA (1833bp) protein (611aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW95924.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
recQ id=2013958 bin=GWD2_Deltaproteobacteria_55_8 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RecQ familyATP-dependent DNA helicase
13_1_40cm_3_scaffold_60_21
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20300..21226)
DNA (927bp) protein (309aa)
Cyclic pyranopterin monophosphate synthase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URQ9_9AQUI
molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
moaA; molybdenum cofactor biosynthesis protein A
13_1_40cm_3_scaffold_60_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

21723..22424
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M7A9_GEODF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_1_40cm_3_scaffold_60_23
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(22491..25241)
DNA (2751bp) protein (917aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003778119
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_1_40cm_3_scaffold_60_24
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25282..26550)
DNA (1269bp) protein (423aa)
Putative uncharacterized protein n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WC13_9BURK
hypothetical protein
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AKE04364.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderi
13_1_40cm_3_scaffold_60_25
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

26783..27838
DNA (1056bp) protein (352aa)
Aminotransferase class V n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CIR2_KOSOT
aspartate aminotransferase Tax=RBG_13_WOR_2_41_10_curated
aminotransferase class V
13_1_40cm_3_scaffold_60_26
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

27865..30000
DNA (2136bp) protein (712aa)
glgP; glycogen phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
glgP; glycogen phosphorylase (EC:2.4.1.1)
Glycogen phosphorylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCT3_9BACT rbh
13_1_40cm_3_scaffold_60_27
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(30095..30676)
DNA (582bp) protein (194aa)
dienelactone hydrolase; K07020 id=14632694 bin=bin9_gal15 species=Arthrobacter sp. genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
dienelactone hydrolase; K07020 Tax=CSP1_3_Armatimonadetes
alpha/beta hydrolase fold protein, dienelactone hydrolase family
13_1_40cm_3_scaffold_60_28
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(30678..30941)
DNA (264bp) protein (88aa)
amylopullulanase Tax=RBG_16_Planctomycetes_43_13_curated
Amylopullulanase id=2686528 bin=GWF2_OP9_related_35_9 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
alpha-amylase/alpha-mannosidase
13_1_40cm_3_scaffold_60_29
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

comp(30988..32190)
DNA (1203bp) protein (401aa)
amylopullulanase Tax=CG_Elusi_03
Amylopullulanase id=4319235 bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
glycoside hydrolase family protein
13_1_40cm_3_scaffold_60_30
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

32316..33614
DNA (1299bp) protein (433aa)
Transporter, YjgP/YjgQ family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRI3_KORVE
YjgP/YjgQ family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
Displaying 30 items

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