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13_1_40cm_3_scaffold_610

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_610_1
unknown

Not on your lists

2..160
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_3_scaffold_610_2
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(180..500)
DNA (321bp) protein (107aa)
MoaD family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8USB7_9AQUI
MoaD family protein {ECO:0000313|EMBL:EDP76072.1}; TaxID=392423 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
MoaD family protein
13_1_40cm_3_scaffold_610_3
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(497..952)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UU72_9AQUI
Uncharacterized protein {ECO:0000313|EMBL:EDP75649.1}; TaxID=392423 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
Mov34/MPN/PAD-1
13_1_40cm_3_scaffold_610_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(949..1596)
DNA (648bp) protein (216aa)
Uncharacterized protein n=2 Tax=Brevibacillus RepID=J2R077_9BACL id=5224585 bin=16ft_combo_ws3_JS1 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
yhzB; hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
Conserved protein of unknown function
13_1_40cm_3_scaffold_610_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1700..3556
DNA (1857bp) protein (619aa)
DNA helicase, Rad3 {ECO:0000313|EMBL:CDM64401.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CDM64401.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinom
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003603ECB
helicase c2
13_1_40cm_3_scaffold_610_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3736..5874)
DNA (2139bp) protein (713aa)
WD40 repeat-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DP20_SINAD
WD40 repeat-containing protein
WD40 repeat-containing protein {ECO:0000313|EMBL:AGA30565.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulispha
13_1_40cm_3_scaffold_610_7
bacterium UASB270, Bacteria

Not on your lists

comp(6354..7997)
DNA (1644bp) protein (548aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK57278.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
13_1_40cm_3_scaffold_610_8
bacterium UASB270, Bacteria

Not on your lists

comp(8001..8828)
DNA (828bp) protein (276aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK57280.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
13_1_40cm_3_scaffold_610_9
bacterium UASB270, Bacteria

Not on your lists

comp(8819..10159)
DNA (1341bp) protein (447aa)
UPI0003D6A677 related cluster n=1 Tax=unknown RepID=UPI0003D6A677
Uncharacterized protein {ECO:0000313|EMBL:GAK57460.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
13_1_40cm_3_scaffold_610_10
bacterium UASB270, Bacteria

Not on your lists

comp(10156..12102)
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B440_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAK57462.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
13_1_40cm_3_scaffold_610_11
bacterium UASB270, Bacteria

Not on your lists

comp(12095..13135)
DNA (1041bp) protein (347aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK57463.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
13_1_40cm_3_scaffold_610_12
bacterium UASB270, Bacteria

Not on your lists

comp(13242..14363)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C3G7_9BACT
Chromosome segregation ATPases {ECO:0000313|EMBL:GAK57465.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
13_1_40cm_3_scaffold_610_13
unknown

Not on your lists

comp(14383..14721)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_3_scaffold_610_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15303..16694
DNA (1392bp) protein (464aa)
CAAX amino terminal protease family protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8HK28_ACACA id=5224343 bin=16ft_combo_ws3_JS1 species=Acanthamoeba castellanii genus=Acanthamoeba taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
CAAX amino terminal protease family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
CAAX prenyl protease family enzyme
13_1_40cm_3_scaffold_610_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

16687..18561
DNA (1875bp) protein (625aa)
CAAX amino terminal protease family protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8HK28_ACACA id=5224343 bin=16ft_combo_ws3_JS1 species=Acanthamoeba castellanii genus=Acanthamoeba taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
CAAX amino terminal protease family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
CAAX prenyl protease family enzyme
13_1_40cm_3_scaffold_610_16
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

18572..19207
DNA (636bp) protein (212aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YYS5_9BACT
radical SAM domain-containing protein
13_1_40cm_3_scaffold_610_17
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

19262..19963
DNA (702bp) protein (234aa)
7-cyano-7-deazaguanine synthase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AG95_IGNAJ
ExsB family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
queC; Queuosine biosynthesis protein QueC
13_1_40cm_3_scaffold_610_18
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

19960..21123
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000362706D
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
13_1_40cm_3_scaffold_610_19
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21190..21762
DNA (573bp) protein (191aa)
Tetratricopeptide repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITN8_KORVE
TPR repeat-containing protein Tax=CG_Syntroph_01
hypothetical protein
13_1_40cm_3_scaffold_610_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(22043..24415)
DNA (2373bp) protein (791aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023J7_SOLUE rbh
13_1_40cm_3_scaffold_610_21
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(24477..25322)
DNA (846bp) protein (282aa)
ABC transporter, peptide/opine/nickel uptake transporter (PepT) family, permease protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9V9_ACIC5
yliD; peptide/opine/nickel ABC transporter permease
ABC transporter, peptide/opine/nickel uptake transporter (PepT) family, permease protein {ECO:0000313|EMBL:ACO34174.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriace
13_1_40cm_3_scaffold_610_22
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(25315..26235)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003678516
ABC peptide transporter, inner membrane subunit Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_3_scaffold_610_23
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(26561..27637)
DNA (1077bp) protein (359aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase, ADA family id=4914535 bin=GWC2_Ignavibacteria_38_9 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
methylated-DNA/protein-cysteinemethyltransferase Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
methylated-DNA/protein-cysteinemethyltransferase
13_1_40cm_3_scaffold_610_24
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

27855..29489
DNA (1635bp) protein (545aa)
Beta-lactamase domain-containing protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BTR8_9GAMM
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
beta-lactamase domain-containing protein
13_1_40cm_3_scaffold_610_25
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(29476..30390)
DNA (915bp) protein (305aa)
Serine phosphatase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITF7_KORVE
serine phosphatase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
serine phosphatase
13_1_40cm_3_scaffold_610_26
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

30630..31679
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003791F44
ATP-dependent DNA ligase
ATP-dependent DNA ligase {ECO:0000313|EMBL:AFL86693.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391
13_1_40cm_3_scaffold_610_27
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(31765..33075)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037381E3
DNA primase small subunit Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
DNA primase small subunit
13_1_40cm_3_scaffold_610_28
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(33149..33640)
DNA (492bp) protein (164aa)
DinB family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Y08_SOLUE
DinB family protein Tax=RBG_16_Acidobacteria_70_10_curated
DinB family protein
13_1_40cm_3_scaffold_610_29
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33665..34027)
DNA (363bp) protein (121aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB20_ANASK
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ACG71668.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacterace
Displaying 29 items

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