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13_1_40cm_3_scaffold_947

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_947_1
unknown

Not on your lists

comp(3..557)
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_3_scaffold_947_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(558..1322)
DNA (765bp) protein (255aa)
membrane protease subunit, stomatin/prohibitin Tax=RBG_13_Acidobacteria_68_16_curated
hypothetical protein id=24432039 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
hypothetical protein
13_1_40cm_3_scaffold_947_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(1427..2824)
DNA (1398bp) protein (466aa)
Nodulation efficiency protein NfeD n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028R2_SOLUE
nodulation efficiency protein NfeD; K07403 membrane-bound serine protease (ClpP class) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
nodulation efficiency protein NfeD
13_1_40cm_3_scaffold_947_4
unknown

Not on your lists

comp(2829..3290)
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_40cm_3_scaffold_947_5
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3406..4125)
DNA (720bp) protein (240aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NUM6_GRAMM
hypothetical protein
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AEU36477.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;"
13_1_40cm_3_scaffold_947_6
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

4180..5358
DNA (1179bp) protein (393aa)
Glycosyl transferase, group 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS83_KORVE
glycosyl transferase, group 1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
group 1 glycosyl transferase
13_1_40cm_3_scaffold_947_7
unknown

Not on your lists

comp(5315..5911)
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_40cm_3_scaffold_947_8
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5930..6388)
DNA (459bp) protein (153aa)
Mov34/MPN/PAD-1 family protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WLK9_GEOS8
Mov34/MPN/PAD-1 family protein
Mov34/MPN/PAD-1 family protein {ECO:0000313|EMBL:ADW13689.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp
13_1_40cm_3_scaffold_947_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6584..7606)
DNA (1023bp) protein (341aa)
Adenylate/Guanylate Cyclase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BN51_9GAMM
chemotaxis protein CheY Tax=RBG_16_Betaproteobacteria_64_18_curated
adenylate/guanylate cyclase
13_1_40cm_3_scaffold_947_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7711..8784)
DNA (1074bp) protein (358aa)
Cell division protein FtsZ n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFJ4_CHLTF
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomo
cell division protein FtsZ
13_1_40cm_3_scaffold_947_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8813..10045)
DNA (1233bp) protein (411aa)
Cell division protein ftsA n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D0T5_MYXXD
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ftsA; cell division protein FtsA
13_1_40cm_3_scaffold_947_12
unknown

Not on your lists

comp(10018..10539)
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_40cm_3_scaffold_947_13
unknown

Not on your lists

comp(10493..10756)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_3_scaffold_947_14
unknown

Not on your lists

comp(10753..10962)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_3_scaffold_947_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(10901..12058)
DNA (1158bp) protein (386aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00046}; EC=6.3.2.8 {ECO:0000255|HAMAP-Rule:MF_00046};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000255|HAMAP-Rule:MF_00046}; Ta
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=MURC_SOLUE
13_1_40cm_3_scaffold_947_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(12223..13299)
DNA (1077bp) protein (359aa)
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylgluco
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=MURG_GEOBB
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
13_1_40cm_3_scaffold_947_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13321..14412)
DNA (1092bp) protein (364aa)
Cell cycle protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKG9_KORVE
cell cycle protein; K03588 cell division protein FtsW Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cell cycle protein
13_1_40cm_3_scaffold_947_18
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(14414..15562)
DNA (1149bp) protein (383aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=MRAY_KORVE
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
13_1_40cm_3_scaffold_947_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(15572..17011)
DNA (1440bp) protein (480aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5E94F
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
13_1_40cm_3_scaffold_947_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(16986..18455)
DNA (1470bp) protein (490aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000255|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000255|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000255|HAMAP-Rule
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=MURE_SOLUE
13_1_40cm_3_scaffold_947_21
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(18466..20526)
DNA (2061bp) protein (687aa)
peptidoglycan glycosyltransferase; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Peptidoglycan synthetase FtsI n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKG4_KORVE
peptidoglycan glycosyltransferase
13_1_40cm_3_scaffold_947_22

Not on your lists

comp(20546..20965)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QKP2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI07812.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cell division protein FtsL
13_1_40cm_3_scaffold_947_23
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(20965..21834)
DNA (870bp) protein (290aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
16S rRNA methyltransferase n=1 Tax=Mastigocladopsis repens RepID=UPI00030823FA
mraW; S-adenosyl-methyltransferase MraW
13_1_40cm_3_scaffold_947_24
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(21850..22290)
DNA (441bp) protein (147aa)
Protein MraZ n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=MRAZ_ACIC5
putative MraZ protein; K03925 MraZ protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
MraZ protein
13_1_40cm_3_scaffold_947_25
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22514..23581
DNA (1068bp) protein (356aa)
Ribosome-binding ATPase YchF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILQ1_KORVE
ychF; GTP-dependent nucleic acid-binding protein EngD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
13_1_40cm_3_scaffold_947_26
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

23661..24257
DNA (597bp) protein (199aa)
Zinc/iron transporter n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJU3_9BACT
Zinc/iron transporter
Zinc/iron transporter Tax=RBG_16_Zixibacteria_40_9_curated
13_1_40cm_3_scaffold_947_27
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists

comp(24259..24672)
DNA (414bp) protein (138aa)
Transcriptional regulators, TraR/DksA family n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ60_9BACT
transcriptional regulators, TraR/DksA family Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
transcriptional regulators, TraR/DksA family
Displaying 27 items

View Taxonomy