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13_1_40cm_3_scaffold_1436_10

Organism: 13_1_40CM_3_Acidobacteria_56_11

near complete RP 41 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 12 / 38
Location: comp(8408..9127)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidoba similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 237.0
  • Bit_score: 249
  • Evalue 4.00e-63
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 239.0
  • Bit_score: 234
  • Evalue 3.50e-59
Pseudouridine synthase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NYL7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 233.0
  • Bit_score: 251
  • Evalue 9.90e-64

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Taxonomy

uncultured Acidobacteria bacterium → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCGGGAGCGGCTCCAGAAGATCCTCGCGCATGCCGGTATTGCTTCACGCCGGCACGCCGAAGAAATAATTCAAGCCGGACGAGTCACTGTGAACGGTCACCGAATGACGGAACTGGGCTCGAAGGCCGATCCCGATGAGGATGTCATCAAGGTCGATGGGAAAAGAGTCCGGTCGCCCCAACGCCACATCTATATCCTGCTGAATAAGCCGAAAAATGTAATGTCCACATCGAGCGATCCTGAAGGGCGTCCGACCGTTGTGGATTACATGAAGGGCAAGATCAGAGAACGAGTCTATCCGGTAGGCCGCCTCGACTTCGGATCGGAAGGTTTAATCATCCTCACGAACGATGGTGAGCTTACGAGATTCCTAACGAAGGCCGGAAACATAAAAAAGGTCTATCGAGTCAAGGTTGCCGGCGAACCGGCCGAACGCGACCTCGACCGCCTGCGGGGAGGAGCCTACATTGACAATGAGTGGCTGGCACCATCGTCGATTGAGCGTTTGAAAAGTGGCGAAAACCCGTGGCTCGAGGTCACATTGCACCAGGGCAAGAATCAACAGATCCGGCGGATGTTTCAGTCGATCGGTCACCCGGTGGAAAAACTCCGCCGCGTGCGCATTGGTTCCCTTGATGACGAAAAGCTTCGGCCAGGCGGCTGGCGGTTTCTCACGCAGGAAGAAGTGAATCAATTTAAACGGGAGTTTCGGAAATGA
PROTEIN sequence
Length: 240
MRERLQKILAHAGIASRRHAEEIIQAGRVTVNGHRMTELGSKADPDEDVIKVDGKRVRSPQRHIYILLNKPKNVMSTSSDPEGRPTVVDYMKGKIRERVYPVGRLDFGSEGLIILTNDGELTRFLTKAGNIKKVYRVKVAGEPAERDLDRLRGGAYIDNEWLAPSSIERLKSGENPWLEVTLHQGKNQQIRRMFQSIGHPVEKLRRVRIGSLDDEKLRPGGWRFLTQEEVNQFKREFRK*