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13_1_40cm_3_scaffold_8596_4

Organism: 13_1_40CM_3_Acidobacteria_56_11

near complete RP 41 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 12 / 38
Location: comp(1587..2330)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P026_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 226.0
  • Bit_score: 281
  • Evalue 9.20e-73
fliA; RNA polymerase sigma factor for flagellar operon Tax=RBG_13_Deltaproteobacteria_65_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.0
  • Coverage: 236.0
  • Bit_score: 259
  • Evalue 6.90e-66
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 231.0
  • Bit_score: 248
  • Evalue 1.90e-63

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Taxonomy

RBG_13_Deltaproteobacteria_65_10_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGACCCATGCCCAAAGAGATGCATTGATTCAAGAAACGCTTCCTCTCATCAAGCACATTGCCCATCGCGTCGCTATACGCTTACCCAGCAATGTCGAAATTAGAGACCTCATCAATGCCGGCGTTCTCGGCTTGATGGATGCCATCGAAAAGTTCGAGCCTGAACGCAATGTCAAATTCAAAACGTACGCCGAAGTCCGCATTCGGGGCGCAATCCTCGACAGTTTGCGGGACCTGGATTGGGCCCCGCGTTCGCTTCGCAAGAAGAGCAAGGACCTTGAAAGAATGTATGCCGACCTCAGCCAGAAGCTGGGGCGTCCCGCAACGGATGAAGAAGTATCGGAAGCAATGGGTGAGAATATCGAAGACTTCCATGAGTTGGTGGATCAGTTGCACGGTCTGACGATCGGCTCGTTCGAAAACCTCAGCGATAGCGAGGACAGCGAAAATTACATCAACTACTATCCCGATGACGGCAGCAACGACCCATACATGAAATTCGAATCGAACGAATTGACCCGGCTGTTGGCAGAAGCTATCGAAGAGCTGCCCGAAAAGGAGCGGTTGGTTCTGTCGCTCTACTATTTCGAAGAATTCACAATGAAAGAAATCGGAGCGCTGCTCGGTGTAAACGAGTCGAGGGTTTCTCAACTTCATACGAAGGCGACCCTGCGCCTTCGAGGAAAACTTGGGAAGCTTGTTCCCGATGTCGACTCCATGTTTCGCACCGCAGCCGCCGGGTAA
PROTEIN sequence
Length: 248
MTHAQRDALIQETLPLIKHIAHRVAIRLPSNVEIRDLINAGVLGLMDAIEKFEPERNVKFKTYAEVRIRGAILDSLRDLDWAPRSLRKKSKDLERMYADLSQKLGRPATDEEVSEAMGENIEDFHELVDQLHGLTIGSFENLSDSEDSENYINYYPDDGSNDPYMKFESNELTRLLAEAIEELPEKERLVLSLYYFEEFTMKEIGALLGVNESRVSQLHTKATLRLRGKLGKLVPDVDSMFRTAAAG*