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13_1_40cm_3_scaffold_1210

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1210_1
unknown

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3..518
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_40cm_3_scaffold_1210_2
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

522..1655
DNA (1134bp) protein (378aa)
Acyl-CoA synthase {ECO:0000313|EMBL:EDM75043.1}; EC=2.3.1.86 {ECO:0000313|EMBL:EDM75043.1};; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocys
Acyl-CoA synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGG7_9DELT
13_1_40cm_3_scaffold_1210_3
unknown

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comp(1876..2628)
DNA (753bp) protein (251aa)

This feature has no annotations

13_1_40cm_3_scaffold_1210_4
unknown

Not on your lists

comp(2743..3411)
DNA (669bp) protein (223aa)

This feature has no annotations

13_1_40cm_3_scaffold_1210_5
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(3726..4247)
DNA (522bp) protein (174aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_3_scaffold_1210_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4787..6100
DNA (1314bp) protein (438aa)
sun protein (fmu protein); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_13_Bathyarchaeota_46_16b_curated
tRNA and rRNA cytosine-C5-methylases n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D1B7_PELTS
Sun; tRNA and rRNA cytosine-C5-methylases
13_1_40cm_3_scaffold_1210_7
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(6156..7475)
DNA (1320bp) protein (440aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1; Short=BPG-independent PGAM 1;; Short=Phosphoglyceromutase 1;; Short=aPGAM 1;; EC=5.4.2.12;; TaxID=187420 species="Archaea; Euryarchaeota;
2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=APGM1_METTH
13_1_40cm_3_scaffold_1210_8
unknown

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7579..7788
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_3_scaffold_1210_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

8095..9999
DNA (1905bp) protein (635aa)
DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RBG_16_Archaea_50_20_curated
DNA topoisomerase 1 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=TOP1_PYRHO
DNA topoisomerase I
13_1_40cm_3_scaffold_1210_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(9915..10448)
DNA (534bp) protein (178aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_1210_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

10577..11302
DNA (726bp) protein (242aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=RBG_13_Bathyarchaeota_38_9_curated
speB-1; agmatinase SpeB (EC:3.5.3.11)
Putative agmatinase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CX18_9ARCH
13_1_40cm_3_scaffold_1210_12
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11601..12410
DNA (810bp) protein (270aa)
Aminotransferase class I and II id=2009528 bin=GWB2_Proteobacteria_55_19 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Deltaproteobacteria_55_19_curated
HPr kinase
13_1_40cm_3_scaffold_1210_13
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(12624..13403)
DNA (780bp) protein (260aa)
DNA primase small subunit n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1T6_FERPA
DNA primase small subunit Tax=RBG_16_Bathyarchaeota_48_13_curated
DNA primase small subunit
13_1_40cm_3_scaffold_1210_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13435..15219)
DNA (1785bp) protein (595aa)
DNA ligase I, ATP-dependent Dnl1 (EC:6.5.1.1)
DNA ligase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGC4_ACIB4
ATP-dependent DNA ligase I Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_1210_15
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

comp(15259..16206)
DNA (948bp) protein (316aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9I0_9ARCH
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.
13_1_40cm_3_scaffold_1210_16
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

16455..17093
DNA (639bp) protein (213aa)
type 11 methyltransferase Tax=CG_Levy_01
Methyltransferase type 11 id=4803517 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
type 11 methyltransferase
13_1_40cm_3_scaffold_1210_17
unknown

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comp(17195..17437)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_3_scaffold_1210_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

17737..18273
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003727633
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_1210_19
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(18339..18722)
DNA (384bp) protein (128aa)
Metal dependent phosphohydrolase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWS1_9ARCH
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EGP93723.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Ni
metal dependent phosphohydrolase
13_1_40cm_3_scaffold_1210_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

19380..19706
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D9Y0_STAHD
Marine sediment metagenome DNA, contig: S06H3_L03387 Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_3_scaffold_1210_21
Thermus sp. 4C, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

20108..20518
DNA (411bp) protein (137aa)
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=446041 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. 4C.;"
13_1_40cm_3_scaffold_1210_22
unknown

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comp(20888..21115)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_3_scaffold_1210_23
unknown

Not on your lists

21840..22334
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_3_scaffold_1210_24
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22411..23010
DNA (600bp) protein (200aa)
Rhomboid family protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YF59_PARAH
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:AGT10088.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminoph
13_1_40cm_3_scaffold_1210_25
unknown

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23475..24572
DNA (1098bp) protein (366aa)

This feature has no annotations

Displaying 25 items

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