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13_1_40cm_3_scaffold_1720

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1720_1
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(3..491)
DNA (489bp) protein (163aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family Tax=RBG_16_Thaumarchaeota_49_8_curated
transposase, IS605 OrfB family
13_1_40cm_3_scaffold_1720_2
unknown

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comp(531..938)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_3_scaffold_1720_3
unknown

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1025..1525
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_40cm_3_scaffold_1720_4
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(1537..2406)
DNA (870bp) protein (290aa)
Putative phosphoesterase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZ62_METPS
phosphoesterase; K06953 Tax=RBG_16_Bathyarchaeota_48_13_curated
putative phosphoesterase
13_1_40cm_3_scaffold_1720_5
RBG_16_Archaea_50_20_curated, Archaea

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2581..2910
DNA (330bp) protein (110aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N2Y3_9ARCH
hypothetical protein
Hypothetical conserved protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_1720_6
unknown

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2969..3121
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_3_scaffold_1720_7
RBG_16_Archaea_50_20_curated, Archaea

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3151..5973
DNA (2823bp) protein (941aa)
ATP-dependent DNA helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_16_Archaea_50_20_curated
ATP-dependent DNA helicase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSN3_METAC
ATP-dependent DNA helicase
13_1_40cm_3_scaffold_1720_8
RBG_16_Archaea_50_20_curated, Archaea

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5980..7116
DNA (1137bp) protein (379aa)
OB-fold nucleic acid binding domain protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C0F2_METCG
replication factor A; K07466 replication factor A1 Tax=RBG_16_Archaea_50_20_curated
OB-fold nucleic acid binding domain-containing protein
13_1_40cm_3_scaffold_1720_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

7138..7575
DNA (438bp) protein (146aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_1720_10
unknown

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7862..8119
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_3_scaffold_1720_11
unknown

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comp(8232..8975)
DNA (744bp) protein (248aa)

This feature has no annotations

13_1_40cm_3_scaffold_1720_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(9495..10841)
DNA (1347bp) protein (449aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19) Tax=RBG_13_Bathyarchaeota_46_16b_curated
4-aminobutyrate aminotransferase (EC:2.6.1.17 2.6.1.11 2.6.1.13)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037E812F
13_1_40cm_3_scaffold_1720_13
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10910..11233)
DNA (324bp) protein (108aa)
Alba, DNA/RNA-binding protein, archaeal (Fragment) n=1 Tax=mine drainage metagenome RepID=T1ALV4_9ZZZZ
DNA/RNA-binding protein AlbA; K03622 archaea-specific DNA-binding protein Tax=RBG_16_Bathyarchaeota_57_9_curated
DNA/RNA-binding protein Alba
13_1_40cm_3_scaffold_1720_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

11325..11708
DNA (384bp) protein (128aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_3_scaffold_1720_15
unknown

Not on your lists

comp(11593..11850)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_3_scaffold_1720_16
RBG_16_Archaea_50_20_curated, Archaea

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11857..12708
DNA (852bp) protein (284aa)
mRNA 3'-end processing factor n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3Z8_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_1720_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(12736..12918)
DNA (183bp) protein (61aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_1720_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12976..14295)
DNA (1320bp) protein (440aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1) Tax=RBG_13_Bathyarchaeota_46_16b_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY7_NITGG
13_1_40cm_3_scaffold_1720_19
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(14430..14936)
DNA (507bp) protein (169aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRJ5_9BACT
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:BAL58712.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
manganese transport transcriptional regulator
13_1_40cm_3_scaffold_1720_20
unknown

Not on your lists

comp(14957..15220)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_3_scaffold_1720_21
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

15803..17356
DNA (1554bp) protein (518aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Thermoanaerobacter ethanolicus JW 200 RepID=F1ZS80_THEET
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EGD53148.1}; TaxID=509192 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobac
EmrB/QacA family drug resistance transporter
13_1_40cm_3_scaffold_1720_trna_1
unknown

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comp(17360..17442)
DNA (83bp)
transferRNA
13_1_40cm_3_scaffold_1720_22
unknown

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17368..17502
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_3_scaffold_1720_23
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17499..18200)
DNA (702bp) protein (234aa)
phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RBG_13_Bathyarchaeota_52_12_curated
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=PGK_METJA
13_1_40cm_3_scaffold_1720_24
unknown

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18261..18392
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_3_scaffold_1720_25
unknown

Not on your lists

18581..18790
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_3_scaffold_1720_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18895..20022
DNA (1128bp) protein (376aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
Displaying 27 items

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