ggKbase home page

13_1_40cm_3_scaffold_3632

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3632_1
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(235..642)
DNA (408bp) protein (136aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KP51_9FIRM
putative nucleic-acid-binding protein containing a Zn-ribbon
Putative nucleic-acid-binding protein containing a Zn-ribbon {ECO:0000313|EMBL:AGL01411.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" s
13_1_40cm_3_scaffold_3632_2
unknown

Not on your lists

comp(647..859)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_3_scaffold_3632_3
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(822..1475)
DNA (654bp) protein (218aa)
Putative uncharacterized protein PH0309 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58047_PYRHO
hypothetical protein
Putative uncharacterized protein PH0309 {ECO:0000313|EMBL:BAA29382.1}; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horik
13_1_40cm_3_scaffold_3632_4
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1543..2697)
DNA (1155bp) protein (385aa)
Acetyl-CoA acetyltransferase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C5V0_DESTA
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AFM24941.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomon
13_1_40cm_3_scaffold_3632_5
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2797..3105)
DNA (309bp) protein (103aa)
Ethyl tert-butyl ether degradation EthD n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9G8_9BACI
Ethyl tert-butyl ether degradation EthD {ECO:0000313|EMBL:EGL81955.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus th
ethyl tert-butyl ether degradation EthD
13_1_40cm_3_scaffold_3632_6
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(3120..4124)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036D6CCD
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_3632_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(4191..4985)
DNA (795bp) protein (265aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17); K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] Tax=RBG_16_Archaea_50_20_curated
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Short chain enoyl-CoA hydratase Enoyl-CoA hydratase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJX9_THEM7
13_1_40cm_3_scaffold_3632_8
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(4989..5762)
DNA (774bp) protein (258aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.17); K01692 enoyl-CoA hydratase [EC:4.2.1.17] Tax=RBG_16_Archaea_50_20_curated
paaF; enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000378A9E8
13_1_40cm_3_scaffold_3632_9
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(5814..6668)
DNA (855bp) protein (285aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157 1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AIG97252.1}; EC=1.1.1.157 {ECO:0000313|EMBL:AIG97252.1};; EC=1.1.1.35 {ECO:0000313|EMBL:AIG97252.1};; TaxID=1344584 species="Archaea; Euryarchaeota; A
3-hydroxyacyl-CoA dehydrogenase (Hbd-3) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29815_ARCFU
13_1_40cm_3_scaffold_3632_10
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6708..7202)
DNA (495bp) protein (165aa)
Acyl-CoA thioester hydrolase (EC:3.1.2.-) Tax=GWA2_Deltaproteobacteria_65_63_curated
Thioesterase superfamily protein id=2274807 bin=GWB2_Deltaproteobacteria_65_81 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
acyl-CoA hydrolase
13_1_40cm_3_scaffold_3632_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

7290..7763
DNA (474bp) protein (158aa)
RpiB/LacA/LacB family sugar-phosphate isomerase; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=14425400 bin=bin1_lowGC species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
RpiB/LacA/LacB family sugar-phosphate isomerase; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=CSP1_2_Dadabacteria
RpiB/LacA/LacB family sugar-phosphate isomerase
13_1_40cm_3_scaffold_3632_12
unknown

Not on your lists

comp(8279..8431)
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_3_scaffold_3632_13
unknown

Not on your lists

comp(8489..9394)
DNA (906bp) protein (302aa)

This feature has no annotations

Displaying 13 items

View Taxonomy