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13_1_40cm_3_scaffold_390

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_390_1
unknown

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comp(3..101)
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

13_1_40cm_3_scaffold_390_2
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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479..1168
-----------------
DNA (690bp)
protein (230aa)
Putative acetyltransferase n=1 Tax=Gordonia aichiensis NBRC 108223 RepID=L7KLZ5_9ACTO
Acetyltransferase {ECO:0000313|EMBL:KJY27553.1}; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
N-acetyltransferase GCN5
13_1_40cm_3_scaffold_390_3
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1285..4212)
-----------------
DNA (2928bp)
protein (976aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000363C342
hypothetical protein Tax=GWF2_Elusimicrobia_62_30_curated
Kelch repeat-containing protein
13_1_40cm_3_scaffold_390_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4720..7032)
-----------------
DNA (2313bp)
protein (771aa)
BNR/Asp-box repeat-containing protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
id=14631018 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
BNR/Asp-box repeat-containing protein
13_1_40cm_3_scaffold_390_5
unknown

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7480..8010
-----------------
DNA (531bp)
protein (177aa)

This feature has no annotations

13_1_40cm_3_scaffold_390_6
unknown

Not on your lists

8182..8454
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

13_1_40cm_3_scaffold_390_7
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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8553..9683
-----------------
DNA (1131bp)
protein (377aa)
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGN9_ARCPA
CMP/dCMP deaminase zinc-binding protein
CMP/dCMP deaminase zinc-binding protein {ECO:0000313|EMBL:ADB57464.1}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeogl
13_1_40cm_3_scaffold_390_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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10105..10344
-----------------
DNA (240bp)
protein (80aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZQ1_9CHLR
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFH82041.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter
arabinose ABC transporter permease
13_1_40cm_3_scaffold_390_9
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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10354..11427
-----------------
DNA (1074bp)
protein (358aa)
Arabinose efflux permease family protein n=1 Tax=Brevibacillus sp. BC25 RepID=J3A6V1_9BACL
MFS transporter {ECO:0000313|EMBL:KGH47932.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
major facilitator transporter
13_1_40cm_3_scaffold_390_10

Not on your lists

11539..12237
-----------------
DNA (699bp)
protein (233aa)
Chlorite dismutase n=1 Tax=mine drainage metagenome RepID=T1BE22_9ZZZZ
Chlorite dismutase {ECO:0000313|EMBL:EQD51324.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_40cm_3_scaffold_390_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

12334..13302
-----------------
DNA (969bp)
protein (323aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL2_9BACT
13_1_40cm_3_scaffold_390_12
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

13347..14297
-----------------
DNA (951bp)
protein (317aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFF6_9CHLR
13_1_40cm_3_scaffold_390_13
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(14270..15103)
-----------------
DNA (834bp)
protein (278aa)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI00038021BF
aldo/keto reductase Tax=RBG_16_Archaea_50_20_curated
oxidoreductase
13_1_40cm_3_scaffold_390_14
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15189..15944)
-----------------
DNA (756bp)
protein (252aa)
uroporphyrinogen-III synthase (EC:4.2.1.75)
Uroporphyrinogen-III synthase n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GGP1_METTF
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:BAM69381.1}; TaxID=866790 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Meth
13_1_40cm_3_scaffold_390_15
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(16012..16836)
-----------------
DNA (825bp)
protein (275aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:00
Probable porphobilinogen deaminase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INK5_NITGG
13_1_40cm_3_scaffold_390_16

Not on your lists

comp(16949..18241)
-----------------
DNA (1293bp)
protein (431aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000367E42D rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN41525.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_3_scaffold_390_17
archaeon Loki, Lokiarchaeota, Archaea

Not on your lists

comp(18229..19212)
-----------------
DNA (984bp)
protein (328aa)
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ97_ARCVS
Delta-aminolevulinic acid dehydratase {ECO:0000313|EMBL:KKK43011.1}; TaxID=1538547 species="Archaea; Lokiarchaeota; 'Lokiarchaeum'.;" source="archaeon Loki.;"
13_1_40cm_3_scaffold_390_18
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19209..20456)
-----------------
DNA (1248bp)
protein (416aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KHW9_9ARCH
13_1_40cm_3_scaffold_390_19
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(20957..21688)
-----------------
DNA (732bp)
protein (244aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:00
Probable porphobilinogen deaminase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INK5_NITGG
13_1_40cm_3_scaffold_390_20
unknown

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comp(22026..22298)
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

13_1_40cm_3_scaffold_390_21
unknown

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22443..22979
-----------------
DNA (537bp)
protein (179aa)

This feature has no annotations

13_1_40cm_3_scaffold_390_22
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

23045..23674
-----------------
DNA (630bp)
protein (210aa)
O-methyltransferase family protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRI1_9BACT
O-methyltransferase family protein {ECO:0000313|EMBL:BAL58698.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
O-methyltransferase family protein
13_1_40cm_3_scaffold_390_23
R_OD1_Uhrbacteria_57_19, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

23858..26203
-----------------
DNA (2346bp)
protein (782aa)
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_57_19_curated
Ribonucleotide reductase of class II (Coenzyme B12-dependent) n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QG73_9DELT
nrdA1; vitamin B12-dependent ribonucleotide reductase
Displaying 23 items

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