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13_1_40cm_3_scaffold_6078

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6078_1

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1..1314
DNA (1314bp) protein (438aa)
seg 423..433 id=130259 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE20750.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_3_scaffold_6078_2

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1340..2740
DNA (1401bp) protein (467aa)
seg 423..433 id=130259 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE20750.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_3_scaffold_6078_3
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2778..3989)
DNA (1212bp) protein (404aa)
Glycosyl transferase family 2 n=1 Tax=Frankia sp. CN3 RepID=G6HI99_9ACTO
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEH08181.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
13_1_40cm_3_scaffold_6078_4
R_OP11_Woesebacteria_44_14, Woesebacteria, Microgenomates, Bacteria

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comp(3982..4761)
DNA (780bp) protein (260aa)
algD; GDP-mannose 6-dehydrogenase (algD) (EC:1.1.1.132); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_44_14_curated
nucleotide sugar dehydrogenase (EC:1.1.1.132)
Nucleotide sugar dehydrogenase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2V3_SPHTD
13_1_40cm_3_scaffold_6078_5
unknown

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comp(4984..5484)
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_40cm_3_scaffold_6078_6
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(5735..6130)
DNA (396bp) protein (132aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV67_9ARCH
putative nucleic acid-binding protein
13_1_40cm_3_scaffold_6078_7
RBG_16_Archaea_50_20_curated, Archaea

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comp(6139..6375)
DNA (237bp) protein (79aa)
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_6078_8
unknown

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comp(6918..7178)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_3_scaffold_6078_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(7373..8629)
DNA (1257bp) protein (419aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K2L4_STREN
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_16_Euryarchaeota_67_27_curated
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_3_scaffold_6078_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(8626..9393)
DNA (768bp) protein (256aa)
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_16_Euryarchaeota_68_13_curated
oppD; oligopeptide ABC transporter ATP-binding protein id=24578966 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Actinopolymorpha alba genus=Actinopolymorpha taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
dipeptide ABC transporter substrate-binding protein
13_1_40cm_3_scaffold_6078_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(9584..10468)
DNA (885bp) protein (295aa)
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein id=24578967 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermosipho melanesiensis genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_3_scaffold_6078_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(10510..11538)
DNA (1029bp) protein (343aa)
peptide ABC transporter permease n=1 Tax=Mastigocladopsis repens RepID=UPI0003114471 rbh
permease of oligopeptide ABC transporter; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
13_1_40cm_3_scaffold_6078_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(11658..13667)
DNA (2010bp) protein (670aa)
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein id=24578969 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Archaeoglobus fulgidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
extracellular solute-binding protein
13_1_40cm_3_scaffold_6078_14
unknown

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comp(13834..13899)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 14 items

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