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13_1_40cm_3_scaffold_759

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_759_1
Caldivirga maquilingensis, Caldivirga, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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2..2164
DNA (2163bp) protein (721aa)
Ribosomal protein S12/S23 n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MB80_CALMQ
30S ribosomal protein S12
Ribosomal protein S12/S23 {ECO:0000313|EMBL:ABW01170.1}; TaxID=397948 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Caldivirga.;" source="Caldivirga maquilingensis
13_1_40cm_3_scaffold_759_2
unknown

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comp(2236..2478)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_3_scaffold_759_3
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(2540..3745)
DNA (1206bp) protein (402aa)
glycine cleavage system T protein (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=GCST_HALOH
glycine cleavage system T protein Tax=RBG_16_Bathyarchaeota_48_13_curated
13_1_40cm_3_scaffold_759_4
RBG_16_Archaea_50_20_curated, Archaea

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4172..4552
DNA (381bp) protein (127aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_759_5
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(4591..5046)
DNA (456bp) protein (152aa)
K+-transporting ATPase, c chain (EC:3.6.3.12)
Potassium-transporting ATPase subunit C n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MTH0_9EURY
Potassium-transporting ATPase subunit C {ECO:0000313|EMBL:EQB64625.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatal
13_1_40cm_3_scaffold_759_6
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(5059..7206)
DNA (2148bp) protein (716aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase B chain n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ARC1_FERAC
hypothetical protein
13_1_40cm_3_scaffold_759_7
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(7217..8740)
DNA (1524bp) protein (508aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase A chain n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ART7_FERAC
hypothetical protein
13_1_40cm_3_scaffold_759_8

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comp(8972..9286)
DNA (315bp) protein (105aa)
AsnC family transcriptional regulator n=1 Tax=mine drainage metagenome RepID=T0ZKG2_9ZZZZ
AsnC family transcriptional regulator {ECO:0000313|EMBL:EQD45133.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
AsnC family transcriptional regulator
13_1_40cm_3_scaffold_759_9
unknown

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comp(9416..9943)
DNA (528bp) protein (176aa)

This feature has no annotations

13_1_40cm_3_scaffold_759_10
unknown

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10075..10461
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_40cm_3_scaffold_759_11
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10473..10769
DNA (297bp) protein (99aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84414.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_3_scaffold_759_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10858..11376
DNA (519bp) protein (173aa)
RecA-superfamily ATPase possibly involved in signal transduction n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KIB8_9FIRM
RecA-superfamily ATPase possibly involved in signal transduction
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:AIF84415.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae;
13_1_40cm_3_scaffold_759_13
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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11373..11546
DNA (174bp) protein (58aa)
putative circadian clock protein KaiC (EC:2.7.11.1)
Putative circadian clock protein, KaiC n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLQ7_METZD
Putative RecA-superfamily ATPases implicated in signal transduction {ECO:0000313|EMBL:AFC99993.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Me
13_1_40cm_3_scaffold_759_14
unknown

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11560..11907
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_3_scaffold_759_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(12085..12420)
DNA (336bp) protein (112aa)
Marine sediment metagenome DNA, contig: S12H4_L00878 Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_3_scaffold_759_16
RBG_16_Archaea_50_20_curated, Archaea

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12869..13843
DNA (975bp) protein (325aa)
cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=RBG_16_Archaea_50_20_curated
Cystathionine beta-synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5Q2_SPHTD
cystathionine beta-synthase
13_1_40cm_3_scaffold_759_17
unknown

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13876..14058
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_3_scaffold_759_18
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(14090..14560)
DNA (471bp) protein (157aa)
ABC transporter related n=1 Tax=Shewanella halifaxensis (strain HAW-EB4) RepID=B0TNU2_SHEHH
antimicrobial peptide ABC transporter ATPase; K02003 putative ABC transport system ATP-binding protein Tax=RBG_16_KB1_OP1_55_9_curated
ABC transporter-like protein
13_1_40cm_3_scaffold_759_19
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(14729..15865)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00037F0FFE
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Chloroflexi_54_18_curated
hypothetical protein
13_1_40cm_3_scaffold_759_20
unknown

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comp(15891..17939)
DNA (2049bp) protein (683aa)

This feature has no annotations

13_1_40cm_3_scaffold_759_21
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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18153..19295
DNA (1143bp) protein (381aa)
Cystathionine gamma-lyase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AJ35_PYRYC
cystathionine gamma-lyase
Cystathionine gamma-lyase {ECO:0000313|EMBL:AEH24553.1}; TaxID=529709 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus yayanosii (strain
13_1_40cm_3_scaffold_759_22
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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19348..19734
DNA (387bp) protein (129aa)
Deazaflavin-dependent nitroreductase family protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P8D4_9MYCO
hypothetical protein Tax=RBG_16_Chloroflexi_64_32_curated
cytochrome C
13_1_40cm_3_scaffold_759_23
unknown

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20142..20396
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_3_scaffold_759_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(20869..22257)
DNA (1389bp) protein (463aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK34_KORVE
peptidase U62, modulator of DNA gyrase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
C69 family peptidase
13_1_40cm_3_scaffold_759_25
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(22272..23720)
DNA (1449bp) protein (483aa)
TldD/PmbA family protein n=2 Tax=Dictyoglomus RepID=B5YBV4_DICT6 id=5225353 bin=16ft_combo_ws3_JS1 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptidase U62, modulator of DNA gyrase; K03568 TldD protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
C69 family peptidase
13_1_40cm_3_scaffold_759_26
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(23830..25161)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TAJ5_9EURY
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_3_scaffold_759_27
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(25298..27055)
DNA (1758bp) protein (586aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15116.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_3_scaffold_759_28
unknown

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27300..27512
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_3_scaffold_759_29
RBG_16_Archaea_50_20_curated, Archaea

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comp(27547..27963)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8E587_9BACL
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
N-acetyltransferase GCN5
13_1_40cm_3_scaffold_759_30
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(27960..28460)
DNA (501bp) protein (167aa)
Transcriptional regulator, PadR-like family n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RH40_METP4
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
PadR-like family transcriptional regulator
Displaying 30 items

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