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13_1_40cm_3_scaffold_1690

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1690_1
unknown

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comp(1..84)
DNA (84bp) protein (28aa)

This feature has no annotations

13_1_40cm_3_scaffold_1690_2
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(96..1010)
DNA (915bp) protein (305aa)
DNA polymerase LigD, polymerase domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIP8_DESK7
DNA polymerase LigD, polymerase domain-containing protein
Tax=BJP_IG2158_Thermincola_46_17
13_1_40cm_3_scaffold_1690_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1104..1763
DNA (660bp) protein (220aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_3_scaffold_1690_4
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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2317..3099
DNA (783bp) protein (261aa)
Probable DNA repair protein Arcve_0208 n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNL7_ARCVS
DNA repair protein
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeo
13_1_40cm_3_scaffold_1690_5
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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3193..4011
DNA (819bp) protein (273aa)
DNA polymerase LigD, ligase domain protein (EC:6.5.1.1)
DNA polymerase LigD, ligase domain protein {ECO:0000313|EMBL:AIG98726.1}; EC=6.5.1.1 {ECO:0000313|EMBL:AIG98726.1};; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archa
DNA ligase, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28549_ARCFU
13_1_40cm_3_scaffold_1690_6
RBG_16_Archaea_50_20_curated, Archaea

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4238..4510
DNA (273bp) protein (91aa)
Elongation factor 1-beta n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=EF1B_STAMF
translation elongation factor aEF-1 beta Tax=RBG_16_Archaea_50_20_curated
ef1B; elongation factor 1-beta
13_1_40cm_3_scaffold_1690_7
unknown

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4578..5015
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_3_scaffold_1690_8
RBG_16_Archaea_50_20_curated, Archaea

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5136..7289
DNA (2154bp) protein (718aa)
AAA family ATPase, CDC48 subfamily (EC:3.6.4.3)
AAA family ATPase, CDC48 subfamily n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TTA3_9ARCH
ATPase AAA Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_1690_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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7353..7565
DNA (213bp) protein (71aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_1690_10
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7837..8169
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMW2_METH6
Thioredoxin
Thioredoxin {ECO:0000313|EMBL:AET64527.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strai
13_1_40cm_3_scaffold_1690_11
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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8287..9348
DNA (1062bp) protein (354aa)
Phosphate regulatory protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N322_9ARCH
phosphate regulatory protein Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphate regulatory protein
13_1_40cm_3_scaffold_1690_12
unknown

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comp(9523..9843)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_3_scaffold_1690_13
Ignisphaera aggregans, Ignisphaera, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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9865..11124
DNA (1260bp) protein (420aa)
UPF0272 protein Igag_1707 n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0SS47_IGNAA
hypothetical protein
UPF0272 protein Igag_1707 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=583356 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignisphaera.;" source="Ignisphaera aggre
13_1_40cm_3_scaffold_1690_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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11134..11916
DNA (783bp) protein (261aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_1690_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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12396..13373
DNA (978bp) protein (326aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 15 items

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