ggKbase home page

13_1_40cm_3_scaffold_1887

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1887_1
unknown

Not on your lists

1..84
DNA (84bp) protein (28aa)

This feature has no annotations

13_1_40cm_3_scaffold_1887_2
unknown

Not on your lists

23..223
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_3_scaffold_1887_3
unknown

Not on your lists

330..446
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_3_scaffold_1887_4
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(621..2507)
DNA (1887bp) protein (629aa)
adenylate/guanylate cyclase with TPR repeats Tax=RBG_16_KB1_OP1_55_9_curated
Serine/threonine protein kinase id=3311955 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
adenylyl cyclase class-3/4/guanylyl cyclase
13_1_40cm_3_scaffold_1887_5
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(3856..4083)
DNA (228bp) protein (76aa)
Conserved archaeal protein n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BLR7_HYPBU
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_1887_6
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(4166..4573)
DNA (408bp) protein (136aa)
Translation initiation factor 2 subunit beta n=2 Tax=Methanothermobacter RepID=D9PUQ0_METTM
eIF2B; translation initiation factor aIF-2, beta subunit; K03238 translation initiation factor 2 subunit 2 Tax=RBG_16_Archaea_50_20_curated
translation initiation factor IF-2
13_1_40cm_3_scaffold_1887_7
unknown

Not on your lists

comp(4945..5145)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_3_scaffold_1887_8
unknown

Not on your lists

comp(5314..5514)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_3_scaffold_1887_9
unknown

Not on your lists

comp(5539..6216)
DNA (678bp) protein (226aa)

This feature has no annotations

13_1_40cm_3_scaffold_1887_10
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

6365..6904
DNA (540bp) protein (180aa)
PHP domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVX0_HALMD
php domain protein; K07053 Tax=RBG_16_Archaea_50_20_curated
PHP domain-containing protein
13_1_40cm_3_scaffold_1887_11
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(6912..7901)
DNA (990bp) protein (330aa)
Cell division protein FtsZ n=1 Tax=Clostridium sp. CAG:389 RepID=R7LTT1_9CLOT
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_16_Bathyarchaeota_48_13_curated
cell division protein FtsZ
13_1_40cm_3_scaffold_1887_12
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8112..9695)
DNA (1584bp) protein (528aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2) Tax=RBG_16_Bathyarchaeota_48_13_curated
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZMA3_THELI
13_1_40cm_3_scaffold_1887_13
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9701..9988)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9L998_9FIRM
glycine cleavage system protein P Tax=RBG_16_RIF_CHLX_69_14_curated
glycine cleavage system protein P
13_1_40cm_3_scaffold_1887_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(9985..10980)
DNA (996bp) protein (332aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003641DBA
glycine dehydrogenase subunit alpha
13_1_40cm_3_scaffold_1887_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

11072..12097
DNA (1026bp) protein (342aa)
Putative glycosyl transferase, family 4 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDG1_NITGG
glycosyl transferase Tax=RBG_13_Bathyarchaeota_38_9_curated
glycosyl transferase, family 4
13_1_40cm_3_scaffold_1887_16
unknown

Not on your lists

12094..12339
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_3_scaffold_1887_17
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(12343..13416)
DNA (1074bp) protein (358aa)
hypothetical protein; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=CG_PER_01
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036F468D
hypothetical protein
13_1_40cm_3_scaffold_1887_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

13534..15252
DNA (1719bp) protein (573aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_1887_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

15273..16520
DNA (1248bp) protein (416aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_1887_20
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(16731..17534)
DNA (804bp) protein (268aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterine
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EK54_9CHLR
13_1_40cm_3_scaffold_1887_21
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

17778..18431
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003696103
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_1887_22
unknown

Not on your lists

comp(18526..18819)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_3_scaffold_1887_23
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(19272..20207)
DNA (936bp) protein (312aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B3_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_3_scaffold_1887_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

20238..20468
DNA (231bp) protein (77aa)
Protein containing DUF72 n=1 Tax=mine drainage metagenome RepID=T0Z1N9_9ZZZZ
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
protein of unknown function DUF72
Displaying 24 items

View Taxonomy