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13_1_40cm_3_scaffold_3110

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3110_1
unknown

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458..616
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_3_scaffold_3110_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(639..983)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILE4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60358.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_3110_3
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(988..1878)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A3N7_NITMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX13299.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SC
13_1_40cm_3_scaffold_3110_4

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2002..3378
DNA (1377bp) protein (459aa)
serS; Serine--tRNA ligase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BDD8_9ARCH
Marine sediment metagenome DNA, contig: S06H3_C00781 {ECO:0000313|EMBL:GAI02023.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_40cm_3_scaffold_3110_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(3349..4056)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDH0_NIAKG
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
13_1_40cm_3_scaffold_3110_6
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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4194..4706
DNA (513bp) protein (171aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Amycolatopsis methanolica RepID=UPI00036D9A24
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=RBG_16_Chloroflexi_56_8_curated
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
13_1_40cm_3_scaffold_3110_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4793..5389
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000373AB61
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_3_scaffold_3110_8
unknown

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comp(5386..5799)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000380997F
13_1_40cm_3_scaffold_3110_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5901..7562
DNA (1662bp) protein (554aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-F05 RepID=UPI000368D784
radical SAM domain protein
Radical SAM domain protein {ECO:0000313|EMBL:AIC14967.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaer
13_1_40cm_3_scaffold_3110_10
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7691..8341
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILE1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83023.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_3_scaffold_3110_11

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comp(8674..9690)
DNA (1017bp) protein (339aa)
Alcohol dehydrogenase n=1 Tax=planctomycete KSU-1 RepID=I3IR33_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKL71049.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
alcohol dehydrogenase
13_1_40cm_3_scaffold_3110_12
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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9825..10274
DNA (450bp) protein (150aa)
Putative regulatory protein, ArsR n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN34_NITGG
regulatory protein ArsR Tax=RBG_13_Bathyarchaeota_52_12_curated
hypothetical protein
13_1_40cm_3_scaffold_3110_13
unknown

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comp(10433..10834)
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_3_scaffold_3110_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(11174..11413)
DNA (240bp) protein (80aa)
PilT protein domain-containing protein Tax=RBG_16_Thaumarchaeota_49_8_curated
PIN-domain containing protein
13_1_40cm_3_scaffold_3110_15
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(11545..11775)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUV3_9ARCH
hypothetical protein
Uncharacterized protein Tax=RBG_16_Thaumarchaeota_49_8_curated
Displaying 15 items

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