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13_1_40cm_3_scaffold_4253

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4253_1
RBG_16_Archaea_50_20_curated, Archaea

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comp(3..632)
DNA (630bp) protein (210aa)
DNA polymerase I (EC:2.7.7.7) Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=2 Tax=candidate division YNPFFA RepID=UPI0003661FB6
DNA-directed DNA polymerase
13_1_40cm_3_scaffold_4253_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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761..1666
DNA (906bp) protein (302aa)
sun protein (fmu protein); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_3_scaffold_4253_3
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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1663..2127
DNA (465bp) protein (155aa)
Fmu (Sun) domain protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_13_Bathyarchaeota_38_9_curated
Fmu protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HLI1_PYRSN
fmu protein
13_1_40cm_3_scaffold_4253_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(2135..2746)
DNA (612bp) protein (204aa)
TATA-box-binding protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV1_9CREN
tbp; TATA-box-binding protein Tax=RBG_13_Bathyarchaeota_38_9_curated
tbp; TATA-box-binding protein
13_1_40cm_3_scaffold_4253_5
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(3156..3470)
DNA (315bp) protein (105aa)
Rieske (2Fe-2S) domain-containing protein; K00363 nitrite reductase (NAD(P)H) small subunit [EC:1.7.1.4] Tax=RBG_16_Chloroflexi_64_32_curated
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase id=14430160 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
Rieske (2Fe-2S) domain-containing protein
13_1_40cm_3_scaffold_4253_6
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3611..4126
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39PX8_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB33696.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallire
13_1_40cm_3_scaffold_4253_7
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4196..4630)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GFJ5_METPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL16043.1}; Flags: Precursor;; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" sour
13_1_40cm_3_scaffold_4253_8
unknown

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5379..7028
DNA (1650bp) protein (550aa)

This feature has no annotations

13_1_40cm_3_scaffold_4253_9
unknown

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7222..7617
DNA (396bp) protein (132aa)

This feature has no annotations

13_1_40cm_3_scaffold_4253_10

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7632..8489
DNA (858bp) protein (286aa)
Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=mine drainage metagenome RepID=T0ZPH6_9ZZZZ
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:EQD46427.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PEP phosphonomutase-like protein
13_1_40cm_3_scaffold_4253_11

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comp(8513..8704)
DNA (192bp) protein (64aa)
CopG family transcriptional regulator n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BBG2_9ARCH
Transcription factor, (NikR) {ECO:0000313|EMBL:AIF22292.1}; TaxID=1456366 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_09_A04.;"
transcriptional regulator, CopG family
Displaying 11 items

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