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13_1_40cm_3_scaffold_2507_4

Organism: 13_1_40CM_3_Crenarchaeota_52_4

partial RP 23 / 55 MC: 3 BSCG 5 / 51 ASCG 14 / 38
Location: 2744..3379

Top 3 Functional Annotations

Value Algorithm Source
rpoD; DNA-directed RNA polymerase subunit D; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=RBG_16_Archaea_50_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 188.0
  • Bit_score: 215
  • Evalue 7.50e-53
RNA polymerase insert n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB81_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 210.0
  • Bit_score: 185
  • Evalue 7.70e-44
RNA polymerase insert similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 210.0
  • Bit_score: 185
  • Evalue 2.20e-44

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Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 636
ATGGACATAAAGCTCCTCACCAAGGAACAAGACACTATCCGTTTTGTCCTGTCTGATGTTTCACCAGCATTTGCCAACGCGCTTCGACGCATAGTCCTTGCCGAAGTCCCGGTGATGGCCATTGAAGATGTTATGATTCTTGAGAACAGCTCCGTCATGTATGATGAGATTCTAGCCCACCGCCTCGGGCTCATCCCAATCACAACTGATCAGAGTTACAATCTTCCCGAGGAATGCACTTGCAAGAGCGAGCTCGGTTGCGAAAAATGTAGAGCATCACTCTCACTAGAAGTTGAGGCCTCGGACCCTGTTGAAATTGTATATACCTCACATCTGAAACCTGAGAACCCTGAAGTGAAACCTGTCTCAGACAAGGTCCCAATCGTTAAACTCGCCCAGGGTCAGAGAATCAAGCTTGAAGCATACGCACGACTTGGAAGAGGAAGAGACCACGCAAAGTGGCAGCCTGCATCCGCATGCACCTATAGTTACGACGCGAAAGCGAAGACCTTCAACTTTCTGGTAGAATCAACAGGAACCTTACCACCCGAAAAGCTAGTTCTAGACGCTGCTCGACTAATCAGCGCAAAAACTCTAGGGTTCGAGGAAGGACTCGGAGGAATATCTGAAAAGTGA
PROTEIN sequence
Length: 212
MDIKLLTKEQDTIRFVLSDVSPAFANALRRIVLAEVPVMAIEDVMILENSSVMYDEILAHRLGLIPITTDQSYNLPEECTCKSELGCEKCRASLSLEVEASDPVEIVYTSHLKPENPEVKPVSDKVPIVKLAQGQRIKLEAYARLGRGRDHAKWQPASACTYSYDAKAKTFNFLVESTGTLPPEKLVLDAARLISAKTLGFEEGLGGISEK*