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13_1_40cm_3_scaffold_2507

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2507_1
RBG_16_Archaea_50_20_curated, Archaea

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737..1237
DNA (501bp) protein (167aa)
30S ribosomal protein S13 n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=RS13_STAMF
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Archaea_50_20_curated
rps13p; 30S ribosomal protein S13
13_1_40cm_3_scaffold_2507_2
RBG_16_Archaea_50_20_curated, Archaea

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1252..1938
DNA (687bp) protein (229aa)
30S ribosomal protein S4 n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=RS4_THESM
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S4
13_1_40cm_3_scaffold_2507_3
unknown

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1981..2526
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_40cm_3_scaffold_2507_4
RBG_16_Archaea_50_20_curated, Archaea

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2744..3379
DNA (636bp) protein (212aa)
rpoD; DNA-directed RNA polymerase subunit D; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=RBG_16_Archaea_50_20_curated
RNA polymerase insert n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB81_9ARCH
RNA polymerase insert
13_1_40cm_3_scaffold_2507_5
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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3376..3834
DNA (459bp) protein (153aa)
50S ribosomal protein L13 n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJ17_PYRSN
50S ribosomal protein L13P
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain NA
13_1_40cm_3_scaffold_2507_6
RBG_16_Archaea_50_20_curated, Archaea

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3831..4241
DNA (411bp) protein (137aa)
30S ribosomal protein S9 n=1 Tax=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) RepID=RS9_DESK1
rps9p; ribosomal protein S9P Rps9p; K02996 small subunit ribosomal protein S9 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S9
13_1_40cm_3_scaffold_2507_7
RBG_16_Archaea_50_20_curated, Archaea

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4489..5166
DNA (678bp) protein (226aa)
30S ribosomal protein S2 n=4 Tax=Methanobrevibacter RepID=RS2_METS3
rps2P; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RBG_16_Archaea_50_20_curated
rps2P; 30S ribosomal protein S2
13_1_40cm_3_scaffold_2507_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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5163..6011
DNA (849bp) protein (283aa)
MEMO1 family protein Mfer_0894 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZG0_METFV
dioxygenase; K06990 Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_3_scaffold_2507_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6121..7014
DNA (894bp) protein (298aa)
mvk; mevalonate kinase (EC:2.7.1.36)
mevalonate kinase n=1 Tax=Actinobaculum urinale RepID=UPI0003B76D7A
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_2507_10
GWF2_TM6_30_66, TM6, Bacteria

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7678..8205
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034C24BF
Isopentenyl-diphosphate Delta-isomerase Tax=GWF2_TM6_30_66
isopentenyl-diphosphate delta-isomerase Idi
13_1_40cm_3_scaffold_2507_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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8260..9537
DNA (1278bp) protein (426aa)
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88); K00054 hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] Tax=RBG_13_Bathyarchaeota_38_9_curated
hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.88)
Hydroxymethylglutaryl-CoA reductase, degradative n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICX3_ACIB4
13_1_40cm_3_scaffold_2507_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(9478..10383)
DNA (906bp) protein (302aa)
putative (S)-2,3-Di-O-farnesylgeranylglyceryl synthase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RBG_13_Bathyarchaeota_38_9_curated
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0A834_CALLD
4-hydroxybenzoate polyprenyltransferase
Displaying 12 items

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