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13_1_40cm_3_scaffold_13234

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_13234_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3..470
DNA (468bp) protein (156aa)
nth; endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFY3_9BACT
13_1_40cm_3_scaffold_13234_2
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

467..1345
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFY4_9BACT
yicC; hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
yicC; hypothetical protein
13_1_40cm_3_scaffold_13234_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1409..2086
DNA (678bp) protein (226aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFY5_9BACT
13_1_40cm_3_scaffold_13234_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2083..2445
DNA (363bp) protein (121aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6); K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFY6_9BACT
13_1_40cm_3_scaffold_13234_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2468..2932
DNA (465bp) protein (155aa)
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] Tax=RIFCS
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5)
Coenzyme A biosynthesis bifunctional protein CoaBC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFY7_9BACT
13_1_40cm_3_scaffold_13234_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

2875..3675
DNA (801bp) protein (267aa)
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5)
Coenzyme A biosynthesis bifunctional protein CoaBC {ECO:0000313|EMBL:CBK42174.1}; EC=4.1.1.36 {ECO:0000313|EMBL:CBK42174.1};; EC=6.3.2.5 {ECO:0000313|EMBL:CBK42174.1};; TaxID=330214 species="Bacteria;
Coenzyme A biosynthesis bifunctional protein CoaBC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFY7_9BACT
13_1_40cm_3_scaffold_13234_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3811..4269
DNA (459bp) protein (153aa)
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFY9_9BACT
13_1_40cm_3_scaffold_13234_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4924..5388
DNA (465bp) protein (155aa)
Acetyl CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFZ1_9BACT
accB; acetyl Coa carboxylase, biotin carboxyl carrier protein
Acetyl CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:CBK42178.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitr
13_1_40cm_3_scaffold_13234_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5418..6767
DNA (1350bp) protein (450aa)
accC; acetyl-Coa carboxylase, biotin carboxylase (EC:6.4.1.2 6.3.4.14); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curate
accC; acetyl-Coa carboxylase, biotin carboxylase (EC:6.4.1.2 6.3.4.14)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFZ2_9BACT rbh
13_1_40cm_3_scaffold_13234_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6812..7453
DNA (642bp) protein (214aa)
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFZ3_9BACT
13_1_40cm_3_scaffold_13234_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7434..7763)
DNA (330bp) protein (110aa)
bioD; dethiobiotin synthetase (EC:6.3.3.3); K01935 dethiobiotin synthetase [EC:6.3.3.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
bioD; dethiobiotin synthetase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFZ4_9BACT
13_1_40cm_3_scaffold_13234_12
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(8257..8454)
DNA (198bp) protein (66aa)
fabG4; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
fabG; 3-ketoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=GWC2_Nitrospirae_57_13_curated
3-oxoacyl-[acyl-carrier-protein] protein reductase id=4047550 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Anoxybacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
13_1_40cm_3_scaffold_13234_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8451..8978)
DNA (528bp) protein (176aa)
fabG4; 3-oxoacyl-ACP reductase (EC:1.1.1.100) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
fabG4; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFZ6_9BACT
13_1_40cm_3_scaffold_13234_14
unknown

Not on your lists

comp(9029..9508)
DNA (480bp) protein (160aa)

This feature has no annotations

13_1_40cm_3_scaffold_13234_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10001..12931)
DNA (2931bp) protein (977aa)
putA; bifunctional protein PutA (EC:1.5.1.12 1.5.99.8); K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_cu
putA; bifunctional protein PutA (EC:1.5.1.12 1.5.99.8)
Bifunctional protein PutA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFZ8_9BACT rbh
13_1_40cm_3_scaffold_13234_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13094..13924
DNA (831bp) protein (277aa)
scdA; stearoyl-CoA 9-desaturase (fragment) (EC:1.14.19.1); K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
acyl-Coa desaturase (fragment) (EC:1.14.19.1)
Stearoyl-CoA 9-desaturase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AE86
13_1_40cm_3_scaffold_13234_17
Leptospirillum sp. Group II 'C75', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14032..14235
DNA (204bp) protein (68aa)
Uncharacterized protein n=4 Tax=Leptospirillum RepID=J9ZCA3_LEPFM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ76711.1}; TaxID=1159328 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group II 'C75'.;"
13_1_40cm_3_scaffold_13234_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14342..15262
DNA (921bp) protein (307aa)
Protein Mrp, putative ATPase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG04_9BACT
mrp; protein Mrp, putative ATPase (fragment)
Protein Mrp, putative ATPase {ECO:0000313|EMBL:CBK42191.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_13234_19
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

15299..15604
DNA (306bp) protein (102aa)
Dioxygenase, ferredoxin subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG05_9BACT
dioxygenase, ferredoxin subunit Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
dioxygenase, ferredoxin subunit
13_1_40cm_3_scaffold_13234_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15656..16621
DNA (966bp) protein (322aa)
pdhA; dehydrogenase (E1) component of pyruvate dehydrogenase complex subunit alpha (acetyl-transferring) (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139, ECO:0000313|EMBL:CBK43623.1};; TaxID=330214 species="Bacteria; Nitrospirae
Dehydrogenase (E1) component of pyruvate dehydrogenase complex, alpha subunit (Acetyl-transferring) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Z1_9BACT rbh
13_1_40cm_3_scaffold_13234_21
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

16628..17605
DNA (978bp) protein (326aa)
pdhB; dehydrogenase (E1) component of pyruvate dehydrogenase complex subunit beta (Transketolase) (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=RBG_19FT_COMBO_
pdhB; dehydrogenase (E1) component of pyruvate dehydrogenase complex subunit beta (Transketolase) (EC:1.2.4.1)
Dehydrogenase (E1) component of pyruvate dehydrogenase complex, beta subunit (Transketolase) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Z0_9BACT
13_1_40cm_3_scaffold_13234_22
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17623..17991
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG06_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42193.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_13234_23
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

18030..18383
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG07_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_13234_24
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

18401..19549
DNA (1149bp) protein (383aa)
pdhC; dihydrolipoamide acetyltransferase (E2) component of pyruvate dehydrogenase complex (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] T
pdhC; dihydrolipoamide acetyltransferase (E2) component of pyruvate dehydrogenase complex (EC:2.3.1.12)
Dihydrolipoamide acetyltransferase (E2) component of pyruvate dehydrogenase complex n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Y9_9BACT rbh
Displaying 24 items

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