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13_1_40cm_3_scaffold_1117

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1117_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(3..641)
DNA (639bp) protein (213aa)
putative quinol-cytochrome c reductase iron-sulfur subunit modulated with PRC-barrel (EC:1.10.2.2)
Putative Quinol-cytochrome c reductase, iron-sulfur subunit, modulated with PRC-barrel (Modular protein) {ECO:0000313|EMBL:CBK40662.1}; EC=1.10.2.2 {ECO:0000313|EMBL:CBK40662.1};; TaxID=330214 species
Putative Quinol-cytochrome c reductase, iron-sulfur subunit, modulated with PRC-barrel (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBQ3_9BACT
13_1_40cm_3_scaffold_1117_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(643..735)
DNA (93bp) protein (31aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_3_scaffold_1117_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(735..1430)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBQ2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1117_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1471..2421)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBQ1_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1117_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2426..3136)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBQ1_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1117_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3138..3710)
DNA (573bp) protein (191aa)
Putative Cytochrome c n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBQ0_9BACT
putative cytochrome c Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative cytochrome c
13_1_40cm_3_scaffold_1117_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3968..4507)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBP9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1117_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(4815..5204)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBP8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1117_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5250..6266)
DNA (1017bp) protein (339aa)
Radical SAM protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBP7_9BACT rbh
radical SAM protein
Radical SAM protein {ECO:0000313|EMBL:CBK40656.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_1117_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6446..6544)
DNA (99bp) protein (33aa)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_3_scaffold_1117_11
unknown

Not on your lists

6987..7664
DNA (678bp) protein (226aa)

This feature has no annotations

13_1_40cm_3_scaffold_1117_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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7743..8453
DNA (711bp) protein (237aa)
2,3-diketo-5-methylthio-1-phosphopentane phosphatase (phosphoserine phosphatase) (serB) (EC:3.1.3.3)
Putative 2, 3-diketo-5-methylthio-1-phosphopentane phosphatase (Phosphoserine phosphatase) (SerB) {ECO:0000313|EMBL:CBE67544.1}; EC=3.1.3.3 {ECO:0000313|EMBL:CBE67544.1};; TaxID=671143 species="Bacter
Putative 2, 3-diketo-5-methylthio-1-phosphopentane phosphatase (Phosphoserine phosphatase) (SerB) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW1_9BACT
13_1_40cm_3_scaffold_1117_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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8450..9847
DNA (1398bp) protein (466aa)
Aminotransferase class-III n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW0_9BACT rbh
aminotransferase class-III
Aminotransferase class-III {ECO:0000313|EMBL:CBE67543.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_3_scaffold_1117_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

9826..10830
DNA (1005bp) protein (335aa)
Putative Alpha/beta hydrolase fold n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJV9_9BACT rbh
alpha/beta hydrolase
Putative Alpha/beta hydrolase fold {ECO:0000313|EMBL:CBE67542.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_3_scaffold_1117_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists

10935..11675
DNA (741bp) protein (247aa)
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.41) id=14430265 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.41) Tax=CSP1_5_NC10
fabF-2; 3-oxoacyl-(acyl carrier protein) synthase II
13_1_40cm_3_scaffold_1117_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11665..12123
DNA (459bp) protein (153aa)
3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] id=14625123 bin=bin7_NC10_sister species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
3-oxoacyl-ACP synthase
13_1_40cm_3_scaffold_1117_17
R_Deltaproteobacteria_43_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12206..12475
DNA (270bp) protein (90aa)
Acyl carrier protein n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=ACP_PERMH
acpP; acyl carrier protein
acyl carrier protein; K02078 acyl carrier protein Tax=RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated
13_1_40cm_3_scaffold_1117_trna_1
unknown

Not on your lists

comp(12517..12596)
DNA (80bp)
transferRNA
13_1_40cm_3_scaffold_1117_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(12913..13101)
DNA (189bp) protein (63aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795, ECO:0000313|EMBL:CBK40636.1};; EC=1.17.7.3 {ECO:0000256
13_1_40cm_3_scaffold_1117_19
Paenibacillus sp. P22, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13283..14110
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=uncultured alpha proteobacterium HF0010_13E22 RepID=E0XR17_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDN42671.1}; TaxID=483908 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P22.;"
13_1_40cm_3_scaffold_1117_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(14066..16063)
DNA (1998bp) protein (666aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBM6_9BACT rbh
13_1_40cm_3_scaffold_1117_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(16245..17267)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBM5_9BACT rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1117_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(17277..18479)
DNA (1203bp) protein (401aa)
Putative Surface antigen D15 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBM4_9BACT
putative surface antigen D15 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative surface antigen D15
13_1_40cm_3_scaffold_1117_23
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(18497..19141)
DNA (645bp) protein (215aa)
Putative ABC transporter, auxiliary component, putative ATP-dependent toluene efflux transporter n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBM3_9BACT
putative ABC transporter auxiliary component, putative ATP-dependent toluene efflux transporter; K07323 putative toluene tolerance protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative ABC transporter auxiliary component, putative ATP-dependent toluene efflux transporter
13_1_40cm_3_scaffold_1117_24
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(19146..19589)
DNA (444bp) protein (148aa)
ABC transporter, periplasmic binding component, putative ATP-dependent toluene efflux transporter n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBM2_9BACT
yrbD; putative ATP-dependent toluene efflux ABC transporter periplasmic-binding protein; K02067 putative ABC transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curate
yrbD; putative ATP-dependent toluene efflux ABC transporter periplasmic-binding protein
13_1_40cm_3_scaffold_1117_25
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(19623..20348)
DNA (726bp) protein (242aa)
yrbF; putative ATP-dependent toluene efflux transporter ATPase (EC:3.6.3.-); K02065 putative ABC transport system ATP-binding protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
yrbF; putative ATP-dependent toluene efflux transporter ATPase (EC:3.6.3.-)
ABC transporter, ATPase component, putative ATP-dependent toluene efflux transporter n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBM1_9BACT rbh
13_1_40cm_3_scaffold_1117_26
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(20463..21170)
DNA (708bp) protein (236aa)
ABC transporter, membrane component, putative ATP-dependent toluene efflux transporter n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBM0_9BACT rbh
yrbE; putative toluene efflux ABC transporter ATP-binding protein; K02066 putative ABC transport system permease protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
yrbE; putative toluene efflux ABC transporter ATP-binding protein
13_1_40cm_3_scaffold_1117_27
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(21258..22010)
DNA (753bp) protein (251aa)
putative adenosylhomocysteine nucleosidase (EC:3.2.2.9) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative adenosylhomocysteine nucleosidase (EC:3.2.2.9)
Putative Adenosylhomocysteine nucleosidase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBL9_9BACT
13_1_40cm_3_scaffold_1117_28
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(22071..24248)
DNA (2178bp) protein (726aa)
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
shc; squalene-hopene cyclase (EC:5.4.99.17)
Squalene-hopene cyclase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBL8_9BACT rbh
13_1_40cm_3_scaffold_1117_29
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(24507..25346)
DNA (840bp) protein (280aa)
Chromosome partition protein Smc n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBL7_9BACT
chromosome segregation protein SMC; K03529 chromosome segregation protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative chromosome segregation protein Smc
Displaying items 1-30 of 33 in total

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