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13_1_40cm_3_scaffold_10448

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_10448_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2..211
DNA (210bp) protein (70aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CH59_DESK7
13_1_40cm_3_scaffold_10448_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

186..683
DNA (498bp) protein (166aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCM2_9BACT
13_1_40cm_3_scaffold_10448_trna_1
unknown

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comp(987..1066)
DNA (80bp)
transferRNA
13_1_40cm_3_scaffold_10448_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1249..1563)
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Uncharacterized protein id=1895062 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
13_1_40cm_3_scaffold_10448_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1560..1796)
DNA (237bp) protein (79aa)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_3_scaffold_10448_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1803..2255)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCM7_9BACT
hypothetical protein; K09117 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_10448_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2359..2727)
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:CBK40713.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_10448_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(3268..4368)
DNA (1101bp) protein (367aa)
id=14431128 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
13_1_40cm_3_scaffold_10448_8
unknown

Not on your lists

comp(4411..5022)
DNA (612bp) protein (204aa)

This feature has no annotations

13_1_40cm_3_scaffold_10448_9
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(5085..5753)
DNA (669bp) protein (223aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
13_1_40cm_3_scaffold_10448_10
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(5750..6328)
DNA (579bp) protein (193aa)
Uncharacterized protein id=1994143 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein; K02664 type IV pilus assembly protein PilO Tax=GWC2_Nitrospirae_57_13_curated
13_1_40cm_3_scaffold_10448_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(6334..6660)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGZ1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42528.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_10448_12
unknown

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comp(6683..7039)
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_3_scaffold_10448_13

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comp(7036..7986)
DNA (951bp) protein (317aa)
Marine sediment metagenome DNA, contig: S01H4_S01460 {ECO:0000313|EMBL:GAG83664.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Putative uncharacterized protein id=3638897 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
13_1_40cm_3_scaffold_10448_14
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(7983..9716)
DNA (1734bp) protein (578aa)
General secretion pathway protein E n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGZ3_9BACT rbh
gspE; general secretion pathway protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
gspE; general secretion pathway protein E
13_1_40cm_3_scaffold_10448_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9828..11036)
DNA (1209bp) protein (403aa)
General secretion pathway protein F n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGZ4_9BACT rbh
gspF; general secretion pathway protein F
General secretion pathway protein F {ECO:0000313|EMBL:CBK42531.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_10448_16
Molluscum contagiosum virus, Molluscipoxvirus, Viruses

Not on your lists

comp(11049..11657)
DNA (609bp) protein (203aa)
ORF17 n=1 Tax=Molluscum contagiosum virus subtype 1 RepID=Q85285_MCV1
ORF17 {ECO:0000313|EMBL:AAA16882.1}; TaxID=10280 species="Viruses; dsDNA viruses, no RNA stage; Poxviridae; Chordopoxvirinae; Molluscipoxvirus.;" source="Molluscum contagiosum virus subtype 1 (MOCV) (
13_1_40cm_3_scaffold_10448_17
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11632..11931)
DNA (300bp) protein (100aa)
General secretion pathway protein G n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGZ6_9BACT
type II secretion system protein G; K02456 general secretion pathway protein G Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
gspG2; general secretion pathway protein G
13_1_40cm_3_scaffold_10448_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(12207..12563)
DNA (357bp) protein (119aa)
General secretion pathway protein G n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGZ7_9BACT
gspG3; general secretion pathway protein G
General secretion pathway protein G {ECO:0000313|EMBL:CBK42534.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Displaying 19 items

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