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13_1_40cm_3_scaffold_10542

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_10542_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1..1161
DNA (1161bp) protein (387aa)
degP3; serine protease do (EC:3.4.21.-) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
degP3; serine protease do (EC:3.4.21.-)
Serine protease do n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG83_9BACT rbh
13_1_40cm_3_scaffold_10542_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1170..3269)
DNA (2100bp) protein (700aa)
Elongation factor G (EF-G) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG84_9BACT rbh
fusA; elongation factor G; K02355 elongation factor G Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
fusA; elongation factor G
13_1_40cm_3_scaffold_10542_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3304..3993)
DNA (690bp) protein (230aa)
UPF0301 protein NIDE3217 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI23_9BACT
hypothetical protein; K07735 putative transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_10542_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(4054..4887)
DNA (834bp) protein (278aa)
DNA repair protein RadC homolog n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG85_9BACT rbh
radC2; DNA repair protein RadC-like protein; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
radC2; DNA repair protein RadC-like protein
13_1_40cm_3_scaffold_10542_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4996..5193
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG86_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_10542_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5424..5996
DNA (573bp) protein (191aa)
putative Ribosomal RNA small subunit methyltransferase D (EC:2.1.1.52) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative Ribosomal RNA small subunit methyltransferase D (EC:2.1.1.52)
Putative Ribosomal RNA small subunit methyltransferase D n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG87_9BACT
13_1_40cm_3_scaffold_10542_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5993..6481
DNA (489bp) protein (163aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG88_9BACT
13_1_40cm_3_scaffold_10542_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6478..7671
DNA (1194bp) protein (398aa)
aspC; aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG89_9BACT rbh
13_1_40cm_3_scaffold_10542_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7682..8071
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG90_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_10542_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8079..8459)
DNA (381bp) protein (127aa)
Putative Murein lipoprotein (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG92_9BACT
putative murein lipoprotein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative murein lipoprotein
13_1_40cm_3_scaffold_10542_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9194..10471)
DNA (1278bp) protein (426aa)
purD; phosphoribosylamine-glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
purD; phosphoribosylamine-glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG94_9BACT
13_1_40cm_3_scaffold_10542_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10601..12103)
DNA (1503bp) protein (501aa)
purH; bifunctional purine biosynthesis protein PurH (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] Tax=RIFCSPLOWO2_0
purH; bifunctional purine biosynthesis protein PurH (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG95_9BACT rbh
Displaying 12 items

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