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13_1_40cm_3_scaffold_1446

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1446_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(3..818)
DNA (816bp) protein (272aa)
Putative Tol-Pal system protein YbgF n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIF7_9BACT
putative tol-Pal system protein YbgF Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative tol-Pal system protein YbgF
13_1_40cm_3_scaffold_1446_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(824..2122)
DNA (1299bp) protein (433aa)
Putative Tol-Pal system protein YbgF (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIF8_9BACT
putative tol-Pal system protein YbgF
Putative Tol-Pal system protein YbgF (Modular protein) {ECO:0000313|EMBL:CBK43045.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitro
13_1_40cm_3_scaffold_1446_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(2162..2785)
DNA (624bp) protein (208aa)
Peptidoglycan-associated lipoprotein Pal (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIF9_9BACT
pal; peptidoglycan-associated lipoprotein pal; K03640 peptidoglycan-associated lipoprotein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pal; peptidoglycan-associated lipoprotein pal
13_1_40cm_3_scaffold_1446_4

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comp(2868..4193)
DNA (1326bp) protein (442aa)
TolB protein, periplasmic protein involved in the tonb-independent uptake of group A colicins n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VXH2_9BACT
TolB protein, periplasmic protein involved in the tonb-independent uptake of group A colicins {ECO:0000313|EMBL:AGC72141.1}; TaxID=1256584 species="Bacteria; environmental samples.;" source="unculture
tolB; protein TolB
13_1_40cm_3_scaffold_1446_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(4190..5218)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VSQ7_9BACT
TonB family protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative protein TolA
13_1_40cm_3_scaffold_1446_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5246..5698)
DNA (453bp) protein (151aa)
Protein TolR n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIG2_9BACT
tolR; protein TolR; K03560 biopolymer transport protein TolR Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tolR; protein TolR
13_1_40cm_3_scaffold_1446_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5695..6417)
DNA (723bp) protein (241aa)
MotA/TolQ/ExbB proton channel family protein n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VX00_9BACT
tolQ; protein TolQ; K03562 biopolymer transport protein TolQ Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tolQ; protein TolQ
13_1_40cm_3_scaffold_1446_trna_2
unknown

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comp(6658..6733)
DNA (76bp)
transferRNA
13_1_40cm_3_scaffold_1446_trna_1
unknown

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comp(6825..6897)
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_1446_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6996..7955)
DNA (960bp) protein (320aa)
Tyrosine recombinase XerD n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AN46_PELPD
tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tyrosine recombinase XerD
13_1_40cm_3_scaffold_1446_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8008..10071
DNA (2064bp) protein (688aa)
Putative Extracellular ligand-binding receptor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIG5_9BACT
putative extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative extracellular ligand-binding receptor
13_1_40cm_3_scaffold_1446_10
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10298..10840)
DNA (543bp) protein (181aa)
hypothetical protein Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
13_1_40cm_3_scaffold_1446_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11455..12654
DNA (1200bp) protein (400aa)
gapA; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
gapA; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCA7_9BACT
13_1_40cm_3_scaffold_1446_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12742..13191
DNA (450bp) protein (150aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=330214 species="Bacteria;
Phosphoglycerate kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCA6_9BACT
Displaying 14 items

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