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13_1_40cm_3_scaffold_262

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_262_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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2..931
DNA (930bp) protein (310aa)
Putative ATPase, Mrp homolog n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD0_9BACT rbh
mrp; putative ATPase
Putative ATPase, Mrp homolog {ECO:0000313|EMBL:CBK40189.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_262_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

966..1127
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40190.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_262_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

1124..1687
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40190.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_262_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

1791..2495
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40191.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_262_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2519..2818
DNA (300bp) protein (100aa)
TM2 domain-containing protein id=14429358 bin=bin3_NC10 species=Paenibacillus sp. A9 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_3_scaffold_262_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3279..4031
DNA (753bp) protein (251aa)
Probable transcriptional regulatory protein NIDE0415 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_262_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4127..4735
DNA (609bp) protein (203aa)
ruvA; holliday junction DNA helicase RuvA (EC:3.6.1.-); K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ruvA; holliday junction DNA helicase RuvA (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD4_9BACT
13_1_40cm_3_scaffold_262_8
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

4739..5290
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD5_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_40cm_3_scaffold_262_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

5339..6343
DNA (1005bp) protein (335aa)
ruvB; holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016, ECO:0000313|EMBL:CBK40195.1}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=330214 species="Bacteria; Nitros
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD6_9BACT rbh
13_1_40cm_3_scaffold_262_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6531..7613
DNA (1083bp) protein (361aa)
pheA; p-protein, bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5); K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] Tax=RIFCSPLOWO2_02_FULL_Nitrospi
pheA; p-protein, bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5)
P-protein, bifunctional chorismate mutase/prephenate dehydratase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD7_9BACT rbh
13_1_40cm_3_scaffold_262_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7698..8789
DNA (1092bp) protein (364aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD8_9BACT rbh
13_1_40cm_3_scaffold_262_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8799..9812
DNA (1014bp) protein (338aa)
aroF; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
aroF; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD9_9BACT rbh
13_1_40cm_3_scaffold_262_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

9936..10808
DNA (873bp) protein (291aa)
tyrA; prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tyrA; prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE0_9BACT rbh
13_1_40cm_3_scaffold_262_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10876..12201
DNA (1326bp) protein (442aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE1_9BACT rbh
13_1_40cm_3_scaffold_262_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12516..12896
DNA (381bp) protein (127aa)
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238, ECO:0000313|EMBL:CBK40201.1}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate ki
Cytidylate kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE2_9BACT
13_1_40cm_3_scaffold_262_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

12893..13594
DNA (702bp) protein (234aa)
putative acyltransferase (EC:2.3.-.-); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative acyltransferase (EC:2.3.-.-)
Putative Acyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE3_9BACT
13_1_40cm_3_scaffold_262_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


13652..15382
DNA (1731bp) protein (577aa)
30S ribosomal protein S1 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE4_9BACT
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rpsA; 30S ribosomal protein S1
13_1_40cm_3_scaffold_262_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15398..16294
DNA (897bp) protein (299aa)
peptidase S49, putative signal peptide peptidase SppA (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
peptidase S49, putative signal peptide peptidase SppA (EC:3.4.21.-)
Peptidase S49, putative signal peptide peptidase SppA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE5_9BACT
13_1_40cm_3_scaffold_262_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

16388..16666
DNA (279bp) protein (93aa)
Integration host factor, beta subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE6_9BACT
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ihfB; integration host factor subunit beta
13_1_40cm_3_scaffold_262_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

16689..17681
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE7_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_262_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

17792..18388
DNA (597bp) protein (199aa)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_3_scaffold_262_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(18473..18793)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_262_23
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

19068..20267
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_262_24
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

20429..20629
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAF0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_262_25
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

20761..20919
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAF1_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_40cm_3_scaffold_262_26
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

20999..21337
DNA (339bp) protein (113aa)
putative d-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative d-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAF2_9BACT
13_1_40cm_3_scaffold_262_27
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

21334..21846
DNA (513bp) protein (171aa)
putative d-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative d-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAF2_9BACT
13_1_40cm_3_scaffold_262_28
unknown

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comp(21851..22300)
DNA (450bp) protein (150aa)
secreted protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AECA
13_1_40cm_3_scaffold_262_29
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(22314..22847)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAF3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
Displaying 29 items

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