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13_1_40cm_3_scaffold_3967

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3967_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1..357
DNA (357bp) protein (119aa)
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD9_9BACT
13_1_40cm_3_scaffold_3967_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


478..1272
DNA (795bp) protein (265aa)
50S ribosomal protein L25 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBE0_9BACT
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rplY; 50S ribosomal protein L25
13_1_40cm_3_scaffold_3967_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2224..3129
DNA (906bp) protein (302aa)
Ribosome-binding ATPase YchF n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TA60_HELMI
ychF; GTP-binding protein YchF; K06942 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ychF; GTP-binding protein YchF
13_1_40cm_3_scaffold_3967_4
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3731..4480
DNA (750bp) protein (250aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124E5_POLSJ rbh
short chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABE46097.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromon
13_1_40cm_3_scaffold_3967_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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4709..5140
DNA (432bp) protein (144aa)
30S ribosomal protein S6 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBE7_9BACT
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rpsF; 30S ribosomal protein S6
13_1_40cm_3_scaffold_3967_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5124..5513
DNA (390bp) protein (130aa)
Single-stranded DNA-binding protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBE8_9BACT
ssb; single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ssb; single-stranded DNA-binding protein
13_1_40cm_3_scaffold_3967_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5863..6420
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBF0_9BACT
hypothetical protein; K07040 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_3967_8
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists


6447..6629
DNA (183bp) protein (61aa)
rpmF; ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
50S ribosomal protein L32 id=3567763 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
rpmF; 50S ribosomal protein L32
13_1_40cm_3_scaffold_3967_9
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

6736..7746
DNA (1011bp) protein (337aa)
plsX; fatty acid/phospholipid synthesis protein; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
Phosphate acyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBF2_9BACT
plsX; fatty acid/phospholipid synthesis protein
13_1_40cm_3_scaffold_3967_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7743..8717
DNA (975bp) protein (325aa)
fabH; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
fabH; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBF3_9BACT rbh
13_1_40cm_3_scaffold_3967_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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8849..9664
DNA (816bp) protein (272aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJH9_9BACT
short-chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CBE69564.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfe
13_1_40cm_3_scaffold_3967_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

9721..10617
DNA (897bp) protein (299aa)
fabD; malonyl-CoA-(acyl-carrier-protein) transacylase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
fabD; malonyl-CoA-(acyl-carrier-protein) transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBF4_9BACT rbh
13_1_40cm_3_scaffold_3967_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11093..11440
DNA (348bp) protein (116aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBF5_9BACT
13_1_40cm_3_scaffold_3967_14
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

11538..11792
DNA (255bp) protein (85aa)
Acyl carrier protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBF6_9BACT
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
acpP; acyl carrier protein
13_1_40cm_3_scaffold_3967_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

11814..13064
DNA (1251bp) protein (417aa)
fabF2; 3-oxoacyl-ACP synthase (EC:2.3.1.179 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447, ECO:0000313|EMBL:CBK40566.1};; TaxID=330214 species="Bacteria; Nitrospirae; Ni
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBF7_9BACT
13_1_40cm_3_scaffold_3967_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13074..13808
DNA (735bp) protein (245aa)
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBF8_9BACT
13_1_40cm_3_scaffold_3967_17
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

13915..14538
DNA (624bp) protein (208aa)
ppiA; peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493, ECO:0000313|EMBL:CBK40568.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirale
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBF9_9BACT
Displaying 17 items

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